# Copyright 1999-2019 Gentoo Authors # Distributed under the terms of the GNU General Public License v2 EAPI=6 PYTHON_COMPAT=( python2_7 python3_{5,6} ) PYTHON_REQ_USE="threads(+)" DOC_PV=${PV} inherit fortran-2 distutils-r1 flag-o-matic multiprocessing toolchain-funcs DESCRIPTION="Scientific algorithms library for Python" HOMEPAGE="https://www.scipy.org/" SRC_URI=" mirror://pypi/${PN:0:1}/${PN}/${P}.tar.gz doc? ( https://docs.scipy.org/doc/${PN}-${DOC_PV}/${PN}-html-${PV}.zip -> ${PN}-${DOC_PV}-html.zip https://docs.scipy.org/doc/${PN}-${DOC_PV}/${PN}-ref-${PV}.pdf -> ${PN}-${DOC_PV}-ref.pdf )" LICENSE="BSD LGPL-2" SLOT="0" IUSE="doc sparse test" RESTRICT="!test? ( test )" KEYWORDS="~amd64 ~arm ~ppc ~ppc64 ~x86 ~amd64-linux ~x86-linux ~ppc-macos ~x86-macos" CDEPEND=" >=dev-python/numpy-1.10[lapack,${PYTHON_USEDEP}] sci-libs/arpack:0= virtual/cblas virtual/lapack sparse? ( sci-libs/umfpack:0= )" DEPEND="${CDEPEND} dev-lang/swig >=dev-python/cython-0.22[${PYTHON_USEDEP}] virtual/pkgconfig doc? ( app-arch/unzip ) test? ( dev-python/nose[${PYTHON_USEDEP}] )" RDEPEND="${CDEPEND} dev-python/pillow[${PYTHON_USEDEP}]" DOCS=( HACKING.rst.txt THANKS.txt ) DISTUTILS_IN_SOURCE_BUILD=1 PATCHES=( "${FILESDIR}"/${PN}-0.12.0-blitz.patch "${FILESDIR}"/${PN}-0.12.0-restore-sys-argv.patch ) src_unpack() { default if use doc; then unzip -qo "${DISTDIR}"/${PN}-${DOC_PV}-html.zip -d html || die fi } pc_incdir() { $(tc-getPKG_CONFIG) --cflags-only-I $@ | \ sed -e 's/^-I//' -e 's/[ ]*-I/:/g' -e 's/[ ]*$//' -e 's|^:||' } pc_libdir() { $(tc-getPKG_CONFIG) --libs-only-L $@ | \ sed -e 's/^-L//' -e 's/[ ]*-L/:/g' -e 's/[ ]*$//' -e 's|^:||' } pc_libs() { $(tc-getPKG_CONFIG) --libs-only-l $@ | \ sed -e 's/[ ]-l*\(pthread\|m\)\([ ]\|$\)//g' \ -e 's/^-l//' -e 's/[ ]*-l/,/g' -e 's/[ ]*$//' \ | tr ',' '\n' | sort -u | tr '\n' ',' | sed -e 's|,$||' } python_prepare_all() { # scipy automatically detects libraries by default export {FFTW,FFTW3,UMFPACK}=None use sparse && unset UMFPACK # the missing symbols are in -lpythonX.Y, but since the version can # differ, we just introduce the same scaryness as on Linux/ELF [[ ${CHOST} == *-darwin* ]] \ && append-ldflags -bundle "-undefined dynamic_lookup" \ || append-ldflags -shared [[ -z ${FC} ]] && export FC="$(tc-getFC)" # hack to force F77 to be FC until bug #278772 is fixed [[ -z ${F77} ]] && export F77="$(tc-getFC)" export F90="${FC}" export SCIPY_FCONFIG="config_fc --noopt --noarch" append-fflags -fPIC local libdir="${EPREFIX}"/usr/$(get_libdir) cat >> site.cfg <<-EOF || die [blas] include_dirs = $(pc_incdir cblas) library_dirs = $(pc_libdir cblas blas):${libdir} blas_libs = $(pc_libs cblas blas) [lapack] library_dirs = $(pc_libdir lapack):${libdir} lapack_libs = $(pc_libs lapack) EOF # Drop hashes to force rebuild of cython based .c code rm cythonize.dat || die distutils-r1_python_prepare_all } python_compile() { ${EPYTHON} tools/cythonize.py || die distutils-r1_python_compile \ $(usex python_targets_python3_5 "" "-j $(makeopts_jobs)") \ ${SCIPY_FCONFIG} } python_test() { # fails with bdist_egg. should it be fixed in distutils-r1 eclass? distutils_install_for_testing ${SCIPY_FCONFIG} cd "${TEST_DIR}" || die "no ${TEST_DIR} available" "${PYTHON}" -c \ 'import numpy as np; print("relaxed strides checking:", np.ones((10,1),order="C").flags.f_contiguous)' \ || die # https://github.com/scipy/scipy/issues/5426 "${EPYTHON}" -c \ "import scipy, sys; r = scipy.test('fast', verbose=2, raise_warnings='release'); sys.exit(0 if r.wasSuccessful() else 1)" \ || die "Tests fail with ${EPYTHON}" # "${EPYTHON}" -c \ # "import scipy, sys; r = scipy.test('fast',verbose=2); sys.exit(0 if r.wasSuccessful() else 1)" \ # || die "Tests fail with ${EPYTHON}" } python_install_all() { use doc && \ local DOCS=( "${DISTDIR}"/${PN}-${DOC_PV}-ref.pdf ) \ local HTML_DOCS=( "${WORKDIR}"/html/. ) distutils-r1_python_install_all } python_install() { distutils-r1_python_install ${SCIPY_FCONFIG} } pkg_postinst() { elog "You might want to set the variable SCIPY_PIL_IMAGE_VIEWER" elog "to your prefered image viewer. Example:" elog "\t echo \"export SCIPY_PIL_IMAGE_VIEWER=display\" >> ~/.bashrc" }