From 5baee74fbdce4cfcfc16da6700c613ddaa770cbb Mon Sep 17 00:00:00 2001 From: David Seifert Date: Sat, 25 Feb 2017 21:09:17 +0100 Subject: sci-biology/transfac: Modernise to EAPI 6 Package-Manager: Portage-2.3.3, Repoman-2.3.1 --- sci-biology/transfac/transfac-3.2-r1.ebuild | 44 +++++++++++++++++++++++++++++ sci-biology/transfac/transfac-3.2.ebuild | 41 --------------------------- 2 files changed, 44 insertions(+), 41 deletions(-) create mode 100644 sci-biology/transfac/transfac-3.2-r1.ebuild delete mode 100644 sci-biology/transfac/transfac-3.2.ebuild (limited to 'sci-biology') diff --git a/sci-biology/transfac/transfac-3.2-r1.ebuild b/sci-biology/transfac/transfac-3.2-r1.ebuild new file mode 100644 index 000000000000..7c98be79edae --- /dev/null +++ b/sci-biology/transfac/transfac-3.2-r1.ebuild @@ -0,0 +1,44 @@ +# Copyright 1999-2017 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Id$ + +EAPI=6 + +DESCRIPTION="A database of eucaryotic transcription factors" +HOMEPAGE="http://www.gene-regulation.com/pub/databases.html" +SRC_URI="ftp://ftp.ebi.ac.uk/pub/databases/${PN}/${PN}32.tar.Z" + +LICENSE="public-domain" +SLOT="3" +# Minimal build keeps only the indexed files (if applicable) and the documentation. +# The non-indexed database is not installed. +KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" +IUSE="emboss minimal" + +DEPEND="emboss? ( sci-biology/emboss )" +RDEPEND="${DEPEND}" + +S=${WORKDIR} + +src_compile() { + if use emboss; then + einfo + einfo "Indexing TRANSFAC for usage with EMBOSS" + EMBOSS_DATA="." tfextract -auto -infile class.dat || die "Indexing TRANSFAC failed" + einfo + fi +} + +src_install() { + newdoc readme.txt README + + if ! use minimal; then + insinto /usr/share/${PN}-${SLOT} + doins *.dat + fi + + if use emboss; then + insinto /usr/share/EMBOSS/data + doins tf* + fi +} diff --git a/sci-biology/transfac/transfac-3.2.ebuild b/sci-biology/transfac/transfac-3.2.ebuild deleted file mode 100644 index 9b6e76ce877b..000000000000 --- a/sci-biology/transfac/transfac-3.2.ebuild +++ /dev/null @@ -1,41 +0,0 @@ -# Copyright 1999-2017 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 -# $Id$ - -DESCRIPTION="A database of eucaryotic transcription factors" -HOMEPAGE="http://www.gene-regulation.com/pub/databases.html" -SRC_URI="ftp://ftp.ebi.ac.uk/pub/databases/${PN}/${PN}32.tar.Z" -LICENSE="public-domain" - -SLOT="3" -KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" -IUSE="emboss minimal" -# Minimal build keeps only the indexed files (if applicable) and the documentation. -# The non-indexed database is not installed. - -DEPEND="emboss? ( sci-biology/emboss )" - -RDEPEND="${DEPEND}" - -S="${WORKDIR}" - -src_compile() { - if use emboss; then - echo - einfo "Indexing TRANSFAC for usage with EMBOSS." - EMBOSS_DATA=. tfextract -auto -infile class.dat || die \ - "Indexing TRANSFAC failed." - echo - fi -} - -src_install() { - if ! use minimal; then - insinto /usr/share/${PN}-${SLOT} - doins *.dat || die - fi - if use emboss; then - insinto /usr/share/EMBOSS/data - doins tf* || die - fi -} -- cgit v1.2.3-65-gdbad