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* sci-libs/vtk: Cleanup obsolete versionsAndreas Sturmlechner2019-08-306-1372/+0
| | | | | Package-Manager: Portage-2.3.73, Repoman-2.3.17 Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>
* sci-libs/pcl: Drop 1.8.1Andreas Sturmlechner2019-08-302-84/+0
| | | | | Package-Manager: Portage-2.3.73, Repoman-2.3.17 Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>
* sci-libs/vtkdata: Drop 6.0.0Andreas Sturmlechner2019-08-302-27/+0
| | | | | Package-Manager: Portage-2.3.73, Repoman-2.3.17 Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>
* sci-libs/libgeodecomp: added dependency to libflatarraySlawomir Lis2019-08-301-1/+2
| | | | | | | | This prevents file collision Closes: https://bugs.gentoo.org/548716 Package-Manager: Portage-2.3.73, Repoman-2.3.17 Signed-off-by: Slawek Lis <slis@gentoo.org>
* sci-libs/ViSP: ocv link patch is still needed.Alexis Ballier2019-08-291-1/+2
| | | | | Package-Manager: Portage-2.3.73, Repoman-2.3.17 Signed-off-by: Alexis Ballier <aballier@gentoo.org>
* sci-libs/ViSP: Fix opencv detectionAlexis Ballier2019-08-292-1/+19
| | | | | Package-Manager: Portage-2.3.73, Repoman-2.3.17 Signed-off-by: Alexis Ballier <aballier@gentoo.org>
* sci-libs/ViSP: bump to 3.2.0Alexis Ballier2019-08-292-0/+99
| | | | | Package-Manager: Portage-2.3.73, Repoman-2.3.17 Signed-off-by: Alexis Ballier <aballier@gentoo.org>
* sci-libs/rtabmap: bump to 0.19.3Alexis Ballier2019-08-282-0/+65
| | | | | Package-Manager: Portage-2.3.73, Repoman-2.3.17 Signed-off-by: Alexis Ballier <aballier@gentoo.org>
* sci-libs/rtabmap: Remove oldAlexis Ballier2019-08-283-129/+0
| | | | | Package-Manager: Portage-2.3.73, Repoman-2.3.17 Signed-off-by: Alexis Ballier <aballier@gentoo.org>
* sci-libs/grib_api: [QA] Remove media-libs/jasper depDavid Seifert2019-08-281-3/+2
| | | | | | Bug: https://bugs.gentoo.org/689784 Package-Manager: Portage-2.3.68, Repoman-2.3.16 Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/tensorflow: backport support for grpc-1.23Jason Zaman2019-08-282-0/+342
| | | | | Package-Manager: Portage-2.3.69, Repoman-2.3.16 Signed-off-by: Jason Zaman <perfinion@gentoo.org>
* sci-libs/grib_api: Remove USE=jasperMichał Górny2019-08-272-5/+3
| | | | Signed-off-by: Michał Górny <mgorny@gentoo.org>
* sci-libs/numkit: Initial importAlexey Shvetsov2019-08-233-0/+49
| | | | | Package-Manager: Portage-2.3.72, Repoman-2.3.17 Signed-off-by: Alexey Shvetsov <alexxy@gentoo.org>
* sci-libs/Shapely: version bump to 1.6.4_p2Slawomir Lis2019-08-212-0/+51
| | | | | Package-Manager: Portage-2.3.71, Repoman-2.3.17 Signed-off-by: Slawek Lis <slis@gentoo.org>
* sci-libs/iml: import from the science overlay and bump to EAPI 7.Benda Xu2019-08-194-0/+70
| | | | | | Closes: https://bugs.gentoo.org/563288 Package-Manager: Portage-2.3.69, Repoman-2.3.12 Signed-off-by: Benda Xu <heroxbd@gentoo.org>
* sci-libs/dealii: fix QA issueMatthias Maier2019-08-142-1/+6
| | | | | | Closes: https://bugs.gentoo.org/692082 Package-Manager: Portage-2.3.71, Repoman-2.3.17 Signed-off-by: Matthias Maier <tamiko@gentoo.org>
* */*: update e-mail address of Sergey Torokhovband-a-prend2019-08-141-1/+1
| | | | | | | | | | Change maintainer email of dev-util/codeblocks and sci-libs/cantera packages. Bug: https://bugs.gentoo.org/672596 Signed-off-by: Sergey Torokhov <torokhov-s-a@yandex.ru> Closes: https://github.com/gentoo/gentoo/pull/12702 Signed-off-by: Michał Górny <mgorny@gentoo.org>
* sci-libs/dlib: Add missing PYTHON_REQUIRED_USEMichał Górny2019-08-131-0/+1
| | | | Signed-off-by: Michał Górny <mgorny@gentoo.org>
* sci-libs/trilinos: Fix installMatthias Maier2019-08-131-1/+3
| | | | | | Closes: https://bugs.gentoo.org/691888 Package-Manager: Portage-2.3.71, Repoman-2.3.17 Signed-off-by: Matthias Maier <tamiko@gentoo.org>
* sci-libs/ssm: RemoveMatt Turner2019-08-093-40/+0
| | | | | Closes: https://bugs.gentoo.org/639760 Signed-off-by: Matt Turner <mattst88@gentoo.org>
* sci-libs/monomer-db: RemoveMatt Turner2019-08-093-37/+0
| | | | | Closes: https://bugs.gentoo.org/639760 Signed-off-by: Matt Turner <mattst88@gentoo.org>
* sci-libs/mmdb: RemoveMatt Turner2019-08-097-112/+0
| | | | | Closes: https://bugs.gentoo.org/639760 Signed-off-by: Matt Turner <mattst88@gentoo.org>
* sci-libs/libccp4: RemoveMatt Turner2019-08-093-38/+0
| | | | | Closes: https://bugs.gentoo.org/639760 Signed-off-by: Matt Turner <mattst88@gentoo.org>
* sci-libs/gpp4: RemoveMatt Turner2019-08-093-38/+0
| | | | | Closes: https://bugs.gentoo.org/639760 Signed-off-by: Matt Turner <mattst88@gentoo.org>
* sci-libs/coot-data: RemoveMatt Turner2019-08-093-40/+0
| | | | | Closes: https://bugs.gentoo.org/639760 Signed-off-by: Matt Turner <mattst88@gentoo.org>
* sci-libs/clipper: RemoveMatt Turner2019-08-093-73/+0
| | | | | Closes: https://bugs.gentoo.org/639760 Signed-off-by: Matt Turner <mattst88@gentoo.org>
* sci-libs/cctbx: RemoveMatt Turner2019-08-0911-1335/+0
| | | | | Closes: https://bugs.gentoo.org/639760 Signed-off-by: Matt Turner <mattst88@gentoo.org>
* sci-libs/dcmtk: remove old 3.6.4Joonas Niilola2019-08-091-86/+0
| | | | | Package-Manager: Portage-2.3.71, Repoman-2.3.17 Signed-off-by: Joonas Niilola <juippis@gentoo.org>
* sci-libs/dcmtk: FHS-compliant config file pathsHorea Christian2019-08-091-0/+87
| | | | | | | Package-Manager: Portage-2.3.69, Repoman-2.3.16 Signed-off-by: Horea Christian <chr@chymera.eu> Closes: https://github.com/gentoo/gentoo/pull/12656 Signed-off-by: Joonas Niilola <juippis@gentoo.org>
* sci-libs/cantera: Fix missing RDEPEND="${PYTHON_DEPS}" warningband-a-prend2019-08-091-1/+1
| | | | | | | | Closes: https://bugs.gentoo.org/691404 Signed-off-by: Sergey Torokhov <torokhov_s_a@mail.ru> Closes: https://github.com/gentoo/gentoo/pull/12650 Signed-off-by: Joonas Niilola <juippis@gentoo.org>
* sci-libs/dcmtk: version bump 3.6.4Horea Christian2019-08-082-0/+87
| | | | | | | Package-Manager: Portage-2.3.66, Repoman-2.3.12 Signed-off-by: Horea Christian <chr@chymera.eu> Closes: https://github.com/gentoo/gentoo/pull/12024 Signed-off-by: Joonas Niilola <juippis@gentoo.org>
* sci-libs/tensorflow-estimator: bump to 1.14.0Jason Zaman2019-08-072-1/+1
| | | | | Package-Manager: Portage-2.3.69, Repoman-2.3.16 Signed-off-by: Jason Zaman <perfinion@gentoo.org>
* sci-libs/tensorflow-estimator: update copyright lineJason Zaman2019-08-072-2/+2
| | | | | | Closes: https://bugs.gentoo.org/691646 Package-Manager: Portage-2.3.69, Repoman-2.3.16 Signed-off-by: Jason Zaman <perfinion@gentoo.org>
* sci-libs/tensorflow: update copyright lineJason Zaman2019-08-072-2/+2
| | | | | | Bug: https://bugs.gentoo.org/691646 Package-Manager: Portage-2.3.69, Repoman-2.3.16 Signed-off-by: Jason Zaman <perfinion@gentoo.org>
* sci-libs/trilinos: fix automagic dependencyMatthias Maier2019-08-061-0/+1
| | | | | Package-Manager: Portage-2.3.71, Repoman-2.3.17 Signed-off-by: Matthias Maier <tamiko@gentoo.org>
* sci-libs/trilinos: fix metadata.xmlMatthias Maier2019-08-061-2/+1
| | | | | Package-Manager: Portage-2.3.71, Repoman-2.3.17 Signed-off-by: Matthias Maier <tamiko@gentoo.org>
* sci-libs/dealii: [QA] fix package atom in metadata.xmlMatthias Maier2019-08-051-1/+1
| | | | | Package-Manager: Portage-2.3.70, Repoman-2.3.16 Signed-off-by: Matthias Maier <tamiko@gentoo.org>
* sci-libs/dealii: ebuild maintenanceMatthias Maier2019-08-053-12/+60
| | | | | | | | | | | * remove local description in metadata * avoid warning about unused variable * do not export LDFLAGS in pc files Package-Manager: Portage-2.3.70, Repoman-2.3.16 Signed-off-by: Matthias Maier <tamiko@gentoo.org>
* sci-libs/trilinos: ebuild maintenanceMatthias Maier2019-08-052-7/+5
| | | | | | | | | | | | | * fix rm/mv paths to clean up installation * remove obsolete configuration options * skip setting an RPATH * fix metadata Package-Manager: Portage-2.3.70, Repoman-2.3.16 Signed-off-by: Matthias Maier <tamiko@gentoo.org>
* sci-libs/trilinos: fix typoMatthias Maier2019-08-051-1/+1
| | | | | Package-Manager: Portage-2.3.70, Repoman-2.3.16 Signed-off-by: Matthias Maier <tamiko@gentoo.org>
* sci-libs/dealii: package migration from ::science overlayMatthias Maier2019-08-054-0/+337
| | | | | Package-Manager: Portage-2.3.70, Repoman-2.3.16 Signed-off-by: Matthias Maier <tamiko@gentoo.org>
* sci-libs/trilinos: package migration from ::science overlayMatthias Maier2019-08-053-0/+260
| | | | | Package-Manager: Portage-2.3.70, Repoman-2.3.16 Signed-off-by: Matthias Maier <tamiko@gentoo.org>
* sci-libs/gmsh: package migration from ::science overlayMatthias Maier2019-08-053-0/+95
| | | | | Package-Manager: Portage-2.3.70, Repoman-2.3.16 Signed-off-by: Matthias Maier <tamiko@gentoo.org>
* sci-libs/med: package migration from ::science overlayMatthias Maier2019-08-053-0/+61
| | | | | | | | | | * version bump * new upsteam website and repo * EAPI=7 * fixup installation Package-Manager: Portage-2.3.70, Repoman-2.3.16 Signed-off-by: Matthias Maier <tamiko@gentoo.org>
* sci-libs/openblas: use pkg_setup to do the build env and checks.Benda Xu2019-08-041-26/+21
| | | | | | Closes: https://github.com/gentoo/gentoo/pull/12576 Package-Manager: Portage-2.3.69, Repoman-2.3.12 Signed-off-by: Benda Xu <heroxbd@gentoo.org>
* sci-libs/openblas: Allow custom CFLAGS and add fortran checks.Benda Xu2019-08-042-9/+23
| | | | | | | | | Drop unused USE flags. Suggested-By: Hasan ÇALIŞIR <hasan.calisir@psauxit.com> Closes: https://github.com/gentoo/gentoo/pull/12576 Package-Manager: Portage-2.3.69, Repoman-2.3.12 Signed-off-by: Benda Xu <heroxbd@gentoo.org>
* sci-libs/scikits_timeseries: Works with py3.7Alexey Shvetsov2019-08-031-0/+47
| | | | | Package-Manager: Portage-2.3.69, Repoman-2.3.16 Signed-off-by: Alexey Shvetsov <alexxy@gentoo.org>
* sci-libs/scikits_optimization: Works with py3.7Alexey Shvetsov2019-08-031-0/+31
| | | | | Package-Manager: Portage-2.3.69, Repoman-2.3.16 Signed-off-by: Alexey Shvetsov <alexxy@gentoo.org>
* sci-libs/scikits_learn: Works with py3.7Alexey Shvetsov2019-08-031-0/+106
| | | | | Package-Manager: Portage-2.3.69, Repoman-2.3.16 Signed-off-by: Alexey Shvetsov <alexxy@gentoo.org>
* sci-libs/scikits_image: Works with py3.7Alexey Shvetsov2019-08-031-0/+57
| | | | | Package-Manager: Portage-2.3.69, Repoman-2.3.16 Signed-off-by: Alexey Shvetsov <alexxy@gentoo.org>