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* sci-chemistry/gmxapi: New packageAlexey Shvetsov2019-03-073-0/+73
| | | | | Package-Manager: Portage-2.3.62, Repoman-2.3.12 Signed-off-by: Alexey Shvetsov <alexxy@gentoo.org>
* sci-chemistry/pymol: Version bumpAlexey Shvetsov2019-02-262-0/+116
| | | | | Package-Manager: Portage-2.3.62, Repoman-2.3.12 Signed-off-by: Alexey Shvetsov <alexxy@gentoo.org>
* sci-chemistry/gromacs: added v2018.6Christoph Junghans2019-02-242-0/+272
| | | | | Package-Manager: Portage-2.3.51, Repoman-2.3.11 Signed-off-by: Christoph Junghans <junghans@gentoo.org>
* sci-chemistry/chemical-mime-data: added ~arm64Roy Bamford2019-02-191-2/+2
| | | | | | | Package-Manager: Portage-2.3.60, Repoman-2.3.12 Signed-off-by: Roy Bamford <neddyseagoon@gentoo.org> Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>
* sci-chemistry/gromacs: Version bumpAlexey Shvetsov2019-02-182-0/+309
| | | | | | | | | | Closes: https://bugs.gentoo.org/673350 Closes: https://bugs.gentoo.org/673340 Closes: https://bugs.gentoo.org/670846 Closes: https://bugs.gentoo.org/669460 Closes: https://bugs.gentoo.org/591952 Package-Manager: Portage-2.3.61, Repoman-2.3.12 Signed-off-by: Alexey Shvetsov <alexxy@gentoo.org>
* sci-chemistry/shelx: don't reference ${DISTDIR} in pkg_nofetchBen Kohler2019-02-051-2/+2
| | | | | Package-Manager: Portage-2.3.59, Repoman-2.3.12 Signed-off-by: Ben Kohler <bkohler@gentoo.org>
* sci-chemistry/pymol-plugins-caver: don't reference ${DISTDIR}Ben Kohler2019-02-051-2/+2
| | | | | Package-Manager: Portage-2.3.59, Repoman-2.3.12 Signed-off-by: Ben Kohler <bkohler@gentoo.org>
* sci-chemistry/procheck: don't reference ${DISTDIR} in pkg_nofetchBen Kohler2019-02-051-6/+7
| | | | | Package-Manager: Portage-2.3.59, Repoman-2.3.12 Signed-off-by: Ben Kohler <bkohler@gentoo.org>
* sci-chemistry/namd: don't reference ${DISTDIR} in pkg_nofetchBen Kohler2019-02-051-2/+2
| | | | | Package-Manager: Portage-2.3.59, Repoman-2.3.12 Signed-off-by: Ben Kohler <bkohler@gentoo.org>
* sci-chemistry/msms-bin: don't reference ${DISTDIR} in pkg_nofetchBen Kohler2019-02-051-2/+3
| | | | | Package-Manager: Portage-2.3.59, Repoman-2.3.12 Signed-off-by: Ben Kohler <bkohler@gentoo.org>
* sci-chemistry/molscript: don't reference ${DISTDIR} in pkg_nofetchBen Kohler2019-02-051-2/+2
| | | | | Package-Manager: Portage-2.3.59, Repoman-2.3.12 Signed-off-by: Ben Kohler <bkohler@gentoo.org>
* sci-chemistry/cns: don't reference ${DISTDIR} in pkg_nofetchBen Kohler2019-02-052-4/+4
| | | | | Package-Manager: Portage-2.3.59, Repoman-2.3.12 Signed-off-by: Ben Kohler <bkohler@gentoo.org>
* sci-chemistry/aria: don't reference ${DISTDIR} in pkg_nofetchBen Kohler2019-02-051-2/+2
| | | | | Package-Manager: Portage-2.3.59, Repoman-2.3.12 Signed-off-by: Ben Kohler <bkohler@gentoo.org>
* sci-chemistry/aqua: don't reference ${DISTDIR} in pkg_nofetchBen Kohler2019-02-051-3/+5
| | | | | Package-Manager: Portage-2.3.59, Repoman-2.3.12 Signed-off-by: Ben Kohler <bkohler@gentoo.org>
* sci-chemistry/vmd: don't reference ${DISTDIR} in pkg_nofetchBen Kohler2019-02-042-4/+4
| | | | | | Closes: https://bugs.gentoo.org/663224 Package-Manager: Portage-2.3.59, Repoman-2.3.12 Signed-off-by: Ben Kohler <bkohler@gentoo.org>
* sci-chemistry/votca-ctp: version bumpChristoph Junghans2019-01-313-3/+103
| | | | | Package-Manager: Portage-2.3.51, Repoman-2.3.11 Signed-off-by: Christoph Junghans <junghans@gentoo.org>
* sci-chemistry/votca-xtp: version bumpChristoph Junghans2019-01-313-8/+86
| | | | | Package-Manager: Portage-2.3.51, Repoman-2.3.11 Signed-off-by: Christoph Junghans <junghans@gentoo.org>
* sci-chemistry/votca-csgapps: version bumpChristoph Junghans2019-01-312-0/+34
| | | | | Package-Manager: Portage-2.3.51, Repoman-2.3.11 Signed-off-by: Christoph Junghans <junghans@gentoo.org>
* sci-chemistry/votca-csg: version bumpChristoph Junghans2019-01-313-3/+105
| | | | | Package-Manager: Portage-2.3.51, Repoman-2.3.11 Signed-off-by: Christoph Junghans <junghans@gentoo.org>
* sci-chemistry/gromacs: Version bumpAlexey Shvetsov2019-01-222-0/+272
| | | | | Package-Manager: Portage-2.3.57, Repoman-2.3.12 Signed-off-by: Alexey Shvetsov <alexxy@gentoo.org>
* sci-chemistry/gromacs: Sort metadataAndreas Sturmlechner2019-01-111-5/+5
| | | | | Package-Manager: Portage-2.3.54, Repoman-2.3.12 Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>
* sci-chemistry/gromacs: Drop 2016.2Andreas Sturmlechner2019-01-112-277/+0
| | | | | | | 2016.5 is stable. Package-Manager: Portage-2.3.54, Repoman-2.3.12 Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>
* sci-chemistry/gromacs: Drop 5.1.3 and 5.1.9999Andreas Sturmlechner2019-01-114-537/+0
| | | | | | | Never updated to latest available point release in Gentoo, 5.1.3 is from 2016. Package-Manager: Portage-2.3.54, Repoman-2.3.12 Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>
* sci-chemistry/gromacs: Drop 4.6.9999 and 5.0.{4,9999}Andreas Sturmlechner2019-01-115-823/+0
| | | | | | | | | Declared unsupported upstream and never updated to latest point release in Gentoo. Closes: https://bugs.gentoo.org/674198 Package-Manager: Portage-2.3.54, Repoman-2.3.12 Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>
* sci-chemistry/apbs: EAPI-6 bumpAndreas Sturmlechner2018-12-313-45/+43
| | | | | Package-Manager: Portage-2.3.52, Repoman-2.3.12 Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>
* sci-chemistry/gromacs: Version bumpAlexey Shvetsov2018-12-312-2/+2
| | | | | Signed-off-by: Alexey Shvetsov <alexxy@gentoo.org> Package-Manager: Portage-2.3.51, Repoman-2.3.11
* sci-chemistry/gromacs: remove myself as maintainerChristoph Junghans2018-12-261-4/+0
| | | | | Package-Manager: Portage-2.3.51, Repoman-2.3.11 Signed-off-by: Christoph Junghans <junghans@gentoo.org>
* sci-chemistry/vmd: fix mixed use of tabs and spacesMarty E. Plummer2018-12-241-1/+1
| | | | | | | Closes: https://github.com/gentoo/gentoo/pull/10643 Package-Manager: Portage-2.3.52, Repoman-2.3.12 Signed-off-by: Marty E. Plummer <hanetzer@startmail.com> Signed-off-by: Zac Medico <zmedico@gentoo.org>
* sci-chemistry/gromacs: Version bumpAlexey Shvetsov2018-12-173-15/+61
| | | | | Package-Manager: Portage-2.3.52, Repoman-2.3.12 Signed-off-by: Alexey Shvetsov <alexxy@gentoo.org>
* sci-chemistry/ghemical: Make USE=seamonkey localMichał Górny2018-11-281-0/+1
| | | | Signed-off-by: Michał Górny <mgorny@gentoo.org>
* sci-chemistry/gromacs: arm stable wrt bug #669322Mikle Kolyada2018-11-262-2/+2
| | | | | Signed-off-by: Mikle Kolyada <zlogene@gentoo.org> Package-Manager: Portage-2.3.51, Repoman-2.3.11
* sci-chemistry/votca-csg: 1.4.1 doesn't support gmx-2019_betaChristoph Junghans2018-11-241-1/+1
| | | | | | Package-Manager: Portage-2.3.49, Repoman-2.3.11 Closes: https://bugs.gentoo.org/669522 Signed-off-by: Christoph Junghans <junghans@gentoo.org>
* sci-chemistry/pymol: Fix missing depAlexey Shvetsov2018-11-131-0/+1
| | | | | Signed-off-by: Alexey Shvetsov <alexxy@gentoo.org> Package-Manager: Portage-2.3.51, Repoman-2.3.11
* sci-chemistry/gromacs: Version bumpAlexey Shvetsov2018-11-123-0/+542
| | | | | Package-Manager: Portage-2.3.51, Repoman-2.3.12 Signed-off-by: Alexey Shvetsov <alexxy@gentoo.org>
* sci-chemistry/vmd: Needs to be rebuilt with gromacs updatesPacho Ramos2018-11-101-2/+2
| | | | | Signed-off-by: Pacho Ramos <pacho@gentoo.org> Package-Manager: Portage-2.3.51, Repoman-2.3.11
* sci-chemistry/GromacsWrapper: remove unused patch(es).Michael Mair-Keimberger2018-11-081-28/+0
| | | | | | | Signed-off-by: Michael Mair-Keimberger <m.mairkeimberger@gmail.com> Closes: https://bugs.gentoo.org/667874 Closes: https://github.com/gentoo/gentoo/pull/9959 Signed-off-by: Patrice Clement <monsieurp@gentoo.org>
* sci-chemistry/pymol: Version bumpAlexey Shvetsov2018-11-083-116/+6
| | | | | Package-Manager: Portage-2.3.51, Repoman-2.3.12 Signed-off-by: Alexey Shvetsov <alexxy@gentoo.org>
* sci-chemistry/gromacs: Drop duplicate KEYWORDS lineAndreas Sturmlechner2018-10-2812-15/+3
| | | | | Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org> Package-Manager: Portage-2.3.51, Repoman-2.3.11
* sci-chemistry/gromacs: amd64 stable wrt bug #669322Mikle Kolyada2018-10-272-4/+4
| | | | | Signed-off-by: Mikle Kolyada <zlogene@gentoo.org> Package-Manager: Portage-2.3.49, Repoman-2.3.11
* sci-chemistry/tm-align: Drop oldAndreas Sturmlechner2018-10-262-27/+0
| | | | | Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org> Package-Manager: Portage-2.3.51, Repoman-2.3.11
* sci-chemistry/tm-align: x86 stable (bug #668654)Thomas Deutschmann2018-10-261-1/+1
| | | | | Package-Manager: Portage-2.3.51, Repoman-2.3.11 Signed-off-by: Thomas Deutschmann <whissi@gentoo.org>
* sci-chemistry/gromacs: x86 stable (bug #669322)Thomas Deutschmann2018-10-262-4/+4
| | | | | Package-Manager: Portage-2.3.51, Repoman-2.3.11 Signed-off-by: Thomas Deutschmann <whissi@gentoo.org>
* sci-chemistry/tm-align: amd64 stable wrt bug #668654Mikle Kolyada2018-10-251-1/+1
| | | | | Signed-off-by: Mikle Kolyada <zlogene@gentoo.org> Package-Manager: Portage-2.3.49, Repoman-2.3.11
* sci-chemistry/votca-csg: 1.4.1 doesn't support gmx-2019Christoph Junghans2018-10-241-2/+2
| | | | | | Package-Manager: Portage-2.3.49, Repoman-2.3.11 Signed-off-by: Christoph Junghans <junghans@gentoo.org> Closes: https://bugs.gentoo.org/669522
* sci-chemistry/gromacs: fix python depChristoph Junghans2018-10-231-2/+6
| | | | | Package-Manager: Portage-2.3.49, Repoman-2.3.11 Signed-off-by: Christoph Junghans <junghans@gentoo.org>
* sci-chemistry/gromacs: New beta versionAlexey Shvetsov2018-10-235-5/+591
| | | | | Signed-off-by: Alexey Shvetsov <alexxy@gentoo.org> Package-Manager: Portage-2.3.51, Repoman-2.3.11
* sci-chemistry/gromacs: Drop ~alpha ~ppc64 and ~sparcAlexey Shvetsov2018-10-225-7/+7
| | | | | Signed-off-by: Alexey Shvetsov <alexxy@gentoo.org> Package-Manager: Portage-2.3.49, Repoman-2.3.11
* sci-chemistry/gromacs: Fix deps. Drop unnededAlexey Shvetsov2018-10-229-559/+12
| | | | | Signed-off-by: Alexey Shvetsov <alexxy@gentoo.org> Package-Manager: Portage-2.3.49, Repoman-2.3.11
* sci-chemistry/tm-align: stable 20150914 for ppc/ppc64, bug #668654Sergei Trofimovich2018-10-151-1/+1
| | | | | | Signed-off-by: Sergei Trofimovich <slyfox@gentoo.org> Package-Manager: Portage-2.3.51, Repoman-2.3.11 RepoMan-Options: --include-arches="ppc ppc64"
* sci-chemistry/apbs: httpsAndreas Sturmlechner2018-10-141-1/+1
| | | | | Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org> Package-Manager: Portage-2.3.51, Repoman-2.3.11