Commit message (Collapse) | Author | Age | Files | Lines | |
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* | sci-biology/phred: Rehash | David Seifert | 2018-01-14 | 1 | -1/+1 |
| | | | | | Closes: https://bugs.gentoo.org/642906 Package-Manager: Portage-2.3.19, Repoman-2.3.6 | ||||
* | sci-biology/phrap: Rehash | David Seifert | 2018-01-14 | 1 | -1/+1 |
| | | | | Package-Manager: Portage-2.3.19, Repoman-2.3.6 | ||||
* | sci-biology/consed: Rehash | David Seifert | 2018-01-14 | 1 | -2/+2 |
| | | | | Package-Manager: Portage-2.3.19, Repoman-2.3.6 | ||||
* | sci-biology/repeatmasker-libraries: Update Manifest hashes. | Ulrich Müller | 2018-01-13 | 1 | -1/+1 |
| | | | | Bug: https://bugs.gentoo.org/642906 | ||||
* | sci-biology/fastx_toolkit: Initial addition | David Seifert | 2018-01-10 | 5 | -0/+119 |
| | | | | Package-Manager: Portage-2.3.19, Repoman-2.3.6 | ||||
* | sci-biology/libgtextutils: Initial addition | David Seifert | 2018-01-10 | 5 | -0/+132 |
| | | | | | Closes: https://bugs.gentoo.org/486380 Package-Manager: Portage-2.3.19, Repoman-2.3.6 | ||||
* | sci-biology/bcftools: Update contact for mmokrejs | Michał Górny | 2018-01-06 | 1 | -1/+1 |
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* | sci-biology/STAR: Update contact for mmokrejs | Michał Górny | 2018-01-06 | 1 | -1/+1 |
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* | sci-biology/HTSeq: Update contact for mmokrejs | Michał Górny | 2018-01-06 | 1 | -1/+1 |
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* | sci-biology/arb: Remove old | David Seifert | 2018-01-01 | 8 | -332/+0 |
| | | | | Package-Manager: Portage-2.3.19, Repoman-2.3.6 | ||||
* | sci-biology/iedera: Remove old | David Seifert | 2018-01-01 | 2 | -22/+0 |
| | | | | Package-Manager: Portage-2.3.19, Repoman-2.3.6 | ||||
* | sci-biology/fasta: Remove old | David Seifert | 2018-01-01 | 3 | -84/+0 |
| | | | | Package-Manager: Portage-2.3.19, Repoman-2.3.6 | ||||
* | sci-biology/t-coffee: Remove old | David Seifert | 2017-12-25 | 4 | -135/+0 |
| | | | | Package-Manager: Portage-2.3.19, Repoman-2.3.6 | ||||
* | sci-biology/primer3: Remove old | David Seifert | 2017-12-25 | 3 | -92/+0 |
| | | | | Package-Manager: Portage-2.3.19, Repoman-2.3.6 | ||||
* | sci-biology/dialign-tx: Remove old | David Seifert | 2017-12-25 | 1 | -44/+0 |
| | | | | Package-Manager: Portage-2.3.19, Repoman-2.3.6 | ||||
* | sci-biology/bowtie: Remove old | David Seifert | 2017-12-25 | 3 | -115/+0 |
| | | | | | | Closes: https://bugs.gentoo.org/630140 Package-Manager: Portage-2.3.19, Repoman-2.3.6 Closes: https://github.com/gentoo/gentoo/pull/6626 | ||||
* | sci-biology/dialign2: Port to EAPI 6 | David Seifert | 2017-12-24 | 2 | -13/+62 |
| | | | | Package-Manager: Portage-2.3.19, Repoman-2.3.6 | ||||
* | sci-biology/dialign-tx: Fix C99 inline semantics | David Seifert | 2017-12-24 | 4 | -2/+82 |
| | | | | | | * Also port to EAPI 6 Closes: https://bugs.gentoo.org/640188 Package-Manager: Portage-2.3.19, Repoman-2.3.6 | ||||
* | sci-biology/t-coffee: Fix building with GCC 7 | David Seifert | 2017-12-24 | 4 | -0/+98 |
| | | | | | Closes: https://bugs.gentoo.org/639832 Package-Manager: Portage-2.3.19, Repoman-2.3.6 | ||||
* | sci-biology/primer3: Fix building with GCC 7 | David Seifert | 2017-12-24 | 2 | -9/+32 |
| | | | | | Closes: https://bugs.gentoo.org/638604 Package-Manager: Portage-2.3.19, Repoman-2.3.6 | ||||
* | sci-biology/allpathslg: Sanitize ebuild | David Seifert | 2017-12-24 | 1 | -17/+2 |
| | | | | Package-Manager: Portage-2.3.19, Repoman-2.3.6 | ||||
* | sci-biology/allpathslg: Fix building with GCC 7 | David Seifert | 2017-12-24 | 2 | -2/+16 |
| | | | | | Closes: https://bugs.gentoo.org/638724 Package-Manager: Portage-2.3.19, Repoman-2.3.6 | ||||
* | sci-biology/mosaik: Fix building with GCC 7 | David Seifert | 2017-12-24 | 2 | -8/+45 |
| | | | | | Closes: https://bugs.gentoo.org/638362 Package-Manager: Portage-2.3.19, Repoman-2.3.6 | ||||
* | sci-biology/cufflinks: Fix building with GCC 7 | David Seifert | 2017-12-24 | 3 | -0/+139 |
| | | | | | Closes: https://bugs.gentoo.org/641580 Package-Manager: Portage-2.3.19, Repoman-2.3.6 | ||||
* | sci-biology/bamtools: Remove old | David Seifert | 2017-12-23 | 2 | -36/+0 |
| | | | | Package-Manager: Portage-2.3.19, Repoman-2.3.6 | ||||
* | sci-biology/bamtools: Version bump to 2.5.1 | David Seifert | 2017-12-23 | 2 | -0/+70 |
| | | | | Package-Manager: Portage-2.3.19, Repoman-2.3.6 | ||||
* | sci-biology/bamtools: Add support for static libraries | David Seifert | 2017-12-23 | 1 | -2/+36 |
| | | | | Package-Manager: Portage-2.3.19, Repoman-2.3.6 | ||||
* | sci-biology/*: Update Manifest hashes | Michał Górny | 2017-12-10 | 139 | -196/+196 |
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* | sci-biology/bedtools: Add support for newer python | Pacho Ramos | 2017-12-10 | 1 | -1/+1 |
| | | | | Package-Manager: Portage-2.3.16, Repoman-2.3.6 | ||||
* | sci-biology/wise: Move patches to a distfile | Michał Górny | 2017-12-10 | 6 | -754/+8 |
| | | | | Closes: https://bugs.gentoo.org/620622 | ||||
* | sci-biology/vaal: [QA] Move the patch to a distfile | Michał Górny | 2017-12-10 | 3 | -915/+6 |
| | | | | Closes: https://bugs.gentoo.org/620620 | ||||
* | sci-biology/rmblast: [QA] Move patch to a distfile | Michał Górny | 2017-12-10 | 3 | -869/+6 |
| | | | | Closes: https://bugs.gentoo.org/620616 | ||||
* | sci-biology/goby-cpp: [QA] Move aux files to a distfile | Michał Górny | 2017-12-10 | 5 | -716/+9 |
| | | | | Closes: https://bugs.gentoo.org/620614 | ||||
* | sci-biology/bedtools: [QA] Move patch to a distfile | Michał Górny | 2017-12-10 | 3 | -873/+6 |
| | | | | Closes: https://bugs.gentoo.org/620612 | ||||
* | sci-biology/allpathslg: [QA] Move patches to a distfile | Michał Górny | 2017-12-10 | 4 | -1808/+7 |
| | | | | Closes: https://bugs.gentoo.org/620610 | ||||
* | sci-biology/vienna-rna: [QA] Consistent whitespace in metadata.xml | David Seifert | 2017-11-25 | 1 | -21/+21 |
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* | sci-biology/trnascan-se: [QA] Consistent whitespace in metadata.xml | David Seifert | 2017-11-25 | 1 | -5/+5 |
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* | sci-biology/t-coffee: [QA] Consistent whitespace in metadata.xml | David Seifert | 2017-11-25 | 1 | -5/+5 |
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* | sci-biology/seaview: [QA] Consistent whitespace in metadata.xml | David Seifert | 2017-11-25 | 1 | -5/+5 |
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* | sci-biology/rebase: [QA] Consistent whitespace in metadata.xml | David Seifert | 2017-11-25 | 1 | -5/+5 |
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* | sci-biology/primer3: [QA] Consistent whitespace in metadata.xml | David Seifert | 2017-11-25 | 1 | -8/+8 |
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* | sci-biology/phyml: [QA] Consistent whitespace in metadata.xml | David Seifert | 2017-11-25 | 1 | -9/+9 |
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* | sci-biology/njplot: [QA] Consistent whitespace in metadata.xml | David Seifert | 2017-11-25 | 1 | -5/+5 |
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* | sci-biology/mcl: [QA] Consistent whitespace in metadata.xml | David Seifert | 2017-11-25 | 1 | -9/+7 |
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* | sci-biology/fasttree: [QA] Consistent whitespace in metadata.xml | David Seifert | 2017-11-25 | 1 | -10/+10 |
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* | sci-biology/exonerate: [QA] Consistent whitespace in metadata.xml | David Seifert | 2017-11-25 | 1 | -8/+8 |
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* | sci-biology/emboss: [QA] Consistent whitespace in metadata.xml | David Seifert | 2017-11-25 | 1 | -8/+8 |
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* | sci-biology/cutg: [QA] Consistent whitespace in metadata.xml | David Seifert | 2017-11-25 | 1 | -5/+5 |
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* | sci-biology/arb: Version bump to 6.0.6 | Peter Levine | 2017-11-18 | 5 | -0/+273 |
| | | | | | | Closes: https://bugs.gentoo.org/637118 Package-Manager: Portage-2.3.10, Repoman-2.3.3 Closes: https://github.com/gentoo/gentoo/pull/5942 | ||||
* | sci-biology/kallisto: Initial addition | David Seifert | 2017-11-16 | 4 | -0/+70 |
| | | | | | Closes: https://github.com/gentoo/sci/pull/814 Package-Manager: Portage-2.3.14, Repoman-2.3.6 |