From 86a55f2707b1daa78e8d7e0666756e95ef588d47 Mon Sep 17 00:00:00 2001
From: Pacho Ramos <pacho@gentoo.org>
Date: Thu, 2 Sep 2021 13:48:56 +0200
Subject: sci-chemistry/dssp: Fix boost compat for dssp-2

dssp-2 is still needed by gromacs, try to keep it whenever possible then

Closes: https://bugs.gentoo.org/802417
Closes: https://bugs.gentoo.org/808669
Package-Manager: Portage-3.0.22, Repoman-3.0.3
Signed-off-by: Pacho Ramos <pacho@gentoo.org>
---
 sci-chemistry/dssp/dssp-2.2.1-r3.ebuild | 41 +++++++++++++++++++++++++++++++++
 sci-chemistry/dssp/files/30-dssp        |  1 +
 2 files changed, 42 insertions(+)
 create mode 100644 sci-chemistry/dssp/dssp-2.2.1-r3.ebuild
 create mode 100644 sci-chemistry/dssp/files/30-dssp

(limited to 'sci-chemistry/dssp')

diff --git a/sci-chemistry/dssp/dssp-2.2.1-r3.ebuild b/sci-chemistry/dssp/dssp-2.2.1-r3.ebuild
new file mode 100644
index 000000000000..17a89bb51ffc
--- /dev/null
+++ b/sci-chemistry/dssp/dssp-2.2.1-r3.ebuild
@@ -0,0 +1,41 @@
+# Copyright 1999-2021 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=8
+
+inherit toolchain-funcs
+
+DESCRIPTION="The protein secondary structure standard"
+HOMEPAGE="https://swift.cmbi.umcn.nl/gv/dssp/"
+SRC_URI="ftp://ftp.cmbi.ru.nl/pub/molbio/software/dssp-2/${P}.tgz"
+
+LICENSE="Boost-1.0"
+SLOT="0"
+KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
+IUSE=""
+
+RDEPEND="dev-libs/boost:=[threads(+)]"
+DEPEND="${RDEPEND}"
+
+PATCHES=(
+	"${FILESDIR}"/${PN}-2.1.0-gentoo.patch
+	"${FILESDIR}"/${PN}-2.2.1-boost-1.65-tr1-removal.patch
+)
+
+src_configure() {
+	tc-export CXX
+
+	cat >> make.config <<- EOF || die
+		BOOST_LIB_DIR = "${EPREFIX}/usr/$(get_libdir)"
+		BOOST_INC_DIR = "${EPREFIX}/usr/include"
+	EOF
+}
+
+src_install() {
+	dobin mkdssp
+	dosym mkdssp /usr/bin/dssp
+	doman doc/mkdssp.1
+	dodoc README.txt changelog
+
+	doenvd "${FILESDIR}"/30-${PN}
+}
diff --git a/sci-chemistry/dssp/files/30-dssp b/sci-chemistry/dssp/files/30-dssp
new file mode 100644
index 000000000000..e0a5e0ce5626
--- /dev/null
+++ b/sci-chemistry/dssp/files/30-dssp
@@ -0,0 +1 @@
+DSSP=/usr/bin/dssp
\ No newline at end of file
-- 
cgit v1.2.3-65-gdbad