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* sci-libs/lapack-reference: version bump to 3.6.0Matthias Maier2016-09-295-1/+195
| | | | Package-Manager: portage-2.3.0
* sci-libs/cblas-reference: fix dependenciesMatthias Maier2016-09-291-2/+2
| | | | Package-Manager: portage-2.3.0
* sci-libs/blas-reference: ebuild maintenance, cleanupMatthias Maier2016-09-291-10/+2
| | | | Package-Manager: portage-2.3.0
* sci-libs/cblas-reference: version bump to 20151113Matthias Maier2016-09-294-0/+229
| | | | Package-Manager: portage-2.3.0
* sci-libs/coinor-os: Remove old ebuildDavid Seifert2016-09-292-63/+0
| | | | Package-Manager: portage-2.3.1
* sci-libs/coinor-os: Allow for compiling with GCC 6David Seifert2016-09-293-0/+163
| | | | | | | | Gentoo-bug: 594180 * EAPI=6 * Delete .la files unconditionally Package-Manager: portage-2.3.1
* sci-libs/octomap: add := dep on qglviewerAlexis Ballier2016-09-292-3/+3
| | | | Package-Manager: portage-2.3.1
* sci-libs/octomap: remove oldAlexis Ballier2016-09-292-82/+0
| | | | Package-Manager: portage-2.3.1
* sci-libs/colpack: Remove old ebuildsDavid Seifert2016-09-293-90/+0
| | | | Package-Manager: portage-2.3.1
* sci-libs/colpack: Allow for compiling with GCC 6David Seifert2016-09-293-2/+130
| | | | | | | | Gentoo-bug: 594388 * EAPI=6 * Delete .la files when USE="-static-libs" Package-Manager: portage-2.3.1
* sci-libs/libdap: Version bump to 3.18.1David Seifert2016-09-278-0/+277
| | | | | | | | | | | | | | | Gentoo-bug: 594374 * Make code C++11 compliant (change of noexcept default in C++11) * Import patches from Debian, make testsuite pass * Add proper USE="static-libs" handling with econf back into src_configure() phase * Remove installation of testsuite headers and convenience library * Delete .la files unconditionally * Add missing DEPENDs Package-Manager: portage-2.3.1
* sci-libs/votca-tools: version bumpChristoph Junghans2016-09-272-0/+61
| | | | Package-Manager: portage-2.3.0
* sci-libs/hdf5: Allow cxx & mpi at the same time.Alexis Ballier2016-09-261-1/+6
| | | | | | | This allows to install sci-lib/flann-1.9.1[mpi] for example. See: http://hdf-forum.184993.n3.nabble.com/hdf-forum-HDF5-enable-cxx-enable-threadsafe-conflict-ubuntu-debian-packages-td194242.html Package-Manager: portage-2.3.1
* sci-libs/gdal: amd64 stable wrt bug #586204Agostino Sarubbo2016-09-261-1/+1
| | | | | | Package-Manager: portage-2.2.28 RepoMan-Options: --include-arches="amd64" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
* sci-libs/cqrlib: amd64 stable wrt bug #592998Agostino Sarubbo2016-09-261-1/+1
| | | | | | Package-Manager: portage-2.2.28 RepoMan-Options: --include-arches="amd64" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
* sci-libs/opencascade: USE=vtk needs vtkInteractionStyle, bug 557602.Michael Weber2016-09-262-4/+4
| | | | Package-Manager: portage-2.2.28
* sci-libs/libcmatrix: Allow for compiling with GCC 6David Seifert2016-09-2610-21/+63
| | | | | | | | | Gentoo-bug: 594680 * EAPI=6 * Make PATCHES -p1 compliant * Rename PATCHES to be in ${P}-xyz.patch format Package-Manager: portage-2.3.1
* sci-libs/galib: Allow for compiling with GCC 6David Seifert2016-09-264-0/+284
| | | | | | | | | | Gentoo-bug: 594504 * Patch by Peter Levine * EAPI=6 * [QA] Fix -Wformat-security errors * Fix build system to honour CXX, AR, RANLIB properly Package-Manager: portage-2.3.1
* sci-libs/blas-reference: fix eselect blas alternative, bug #595102Matthias Maier2016-09-252-2/+6
| | | | | | Also set the libblas.so.3 symlink. Package-Manager: portage-2.2.28
* sci-libs/blas-reference: version bump to 20151113 (upstream version 3.6.0)Matthias Maier2016-09-243-0/+186
| | | | Package-Manager: portage-2.2.28
* sci-libs/libmems: Allow for compiling with GCC 6David Seifert2016-09-242-7/+38
| | | | | | | | | Gentoo-bug: 594814 * Patch taken from Debian * Add sub-slot operator for dev-libs/boost * Delete .la files Package-Manager: portage-2.3.1
* sci-libs/hdf5: add use flag for enabling high level APIKacper Kowalik2016-09-222-2/+5
| | | | | | Fixes bug #594560 reported by eroen <gentoo@eroen.eu> Package-Manager: portage-2.2.28
* sci-libs/spr: Allow for compiling with GCC 6David Seifert2016-09-202-10/+80
| | | | | | | Gentoo-bug: 594376 * EAPI=6 Package-Manager: portage-2.3.1
* sci-libs/libgenome: Remove broken live ebuildDavid Seifert2016-09-201-31/+0
| | | | Package-Manager: portage-2.3.1
* sci-libs/libgenome: Allow for compiling with GCC 6David Seifert2016-09-202-9/+47
| | | | | | | Gentoo-bug: 594372 * EAPI=6 Package-Manager: portage-2.3.1
* sci-libs/hdf5: update SRC_URI, fixes #594454Kacper Kowalik2016-09-203-3/+3
| | | | Package-Manager: portage-2.2.28
* sci-libs/hdf5: version bumpKacper Kowalik2016-09-192-0/+105
| | | | Package-Manager: portage-2.2.28
* sci-libs/cifparse-obj: Allow for compiling with GCC 6David Seifert2016-09-172-2/+19
| | | | | | | | Gentoo-bug: 594054 * Remove broken declarations of the 'strcasecmp' and 'strncasecmp' functions. Package-Manager: portage-2.3.0
* sci-libs/geos: Allow for compiling with GCC 6David Seifert2016-09-173-0/+53
| | | | | | | Gentoo-bug: 593934 * Patches taken from Upstream trunk Package-Manager: portage-2.3.0
* sci-libs/flann: Version bump to 1.9.1David Seifert2016-09-152-0/+87
| | | | | | | | | Gentoo-bug: 593856 * EAPI=6 * Removed src_test(), as flann now requires ruby for tests. Package-Manager: portage-2.3.0
* sci-libs/indilib: remove oldMichael Palimaka2016-09-162-43/+0
| | | | Package-Manager: portage-2.3.0
* sci-libs/clipper: Remove old ebuildDavid Seifert2016-09-141-57/+0
| | | | Package-Manager: portage-2.3.0
* sci-libs/clipper: Allow for compiling with GCC 6David Seifert2016-09-142-0/+65
| | | | | | | Gentoo-bug: 585540 * EAPI=6 Package-Manager: portage-2.3.0
* sci-libs/libcerf: Stable for HPPA (bug #577516).Jeroen Roovers2016-09-111-1/+1
| | | | | Package-Manager: portage-2.3.0 RepoMan-Options: --ignore-arches
* sci-libs/gerris: Remove oldDavid Seifert2016-09-094-202/+0
| | | | Package-Manager: portage-2.3.0
* sci-libs/gerris: Patch use of sci-libs/lis function prototypesDavid Seifert2016-09-096-6/+111
| | | | | | | | | | | | | Gentoo-bug: 593282 * EAPI=6 * Made all PATCHES -p1 compliant * Exchanged -D_BSD_SOURCE with -D_DEFAULT_SOURCE in order to silence deprecation from dev-libs/glib * Add subslot operators for sci-libs/netcdf and sci-libs/gsl * Add proper SLOT and operator for sci-libs/fftw * Delete all .la files, as package provides .pc files Package-Manager: portage-2.3.0
* sci-libs/lis: Version bump to 1.6.5David Seifert2016-09-092-1/+1
| | | | Package-Manager: portage-2.3.0
* sci-libs/matio: version bump to 1.5.8Tim Harder2016-09-082-0/+48
| | | | | * add subslot -- 1.5.2 -> 1.5.7 changed the soname version * fix static-libs handling
* sci-libs/lis: Remove oldDavid Seifert2016-09-073-104/+0
| | | | Package-Manager: portage-2.3.0
* sci-libs/lis: Version bump to 1.6.2David Seifert2016-09-073-0/+445
| | | | | | * EAPI=6 Package-Manager: portage-2.3.0
* sci-libs/vtk: remove java@ from the list of maintainers.Patrice Clement2016-09-071-4/+0
| | | | Package-Manager: portage-2.2.28
* sci-libs/dsdp: Removed EAPI 4 ebuild dsdp-5.8-r2.ebuildGerhard Bräunlich2016-09-062-83/+3
| | | | | | | Package-Manager: portage-2.2.28 Closes: https://github.com/gentoo/gentoo/pull/2249 Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/dsdp: revbump (EAPI 4 -> 6)Gerhard Bräunlich2016-09-063-4/+84
| | | | | | | Package-Manager: portage-2.2.28 Closes: https://github.com/gentoo/gentoo/pull/2249 Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/neartree: Version bump to 5.1.1Gerhard Bräunlich2016-09-062-0/+34
| | | | | | | | | * EAPI=6 Package-Manager: portage-2.2.28 Closes: https://github.com/gentoo/gentoo/pull/2255 Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/neartree: Fix overlong DESCRIPTIONDavid Seifert2016-09-061-2/+2
| | | | Package-Manager: portage-2.3.0
* sci-libs/cqrlib: Version bump to 1.1.3 and EAPI 4 -> 6Gerhard Bräunlich2016-09-052-0/+60
| | | | | | | Package-Manager: portage-2.2.28 Closes: https://github.com/gentoo/gentoo/pull/2248 Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/cqrlib: Fix overlong DESCRIPTIONDavid Seifert2016-09-051-2/+2
| | | | Package-Manager: portage-2.3.0
* sci-libs/xdmf2: Call 'python_optimize' only when USE=pythonDavid Seifert2016-09-041-1/+1
| | | | | | Gentoo-bug: 592848 Package-Manager: portage-2.3.0
* sci-libs/xdmf2: Remove heuristics to help detect HDF5_ROOTDavid Seifert2016-09-032-0/+115
| | | | | | | | | | | | Gentoo-bug: 591302 * EAPI=6 * Add missing RDEPEND on dev-libs/boost * Add ${PYTHON_REQUIRED_USE} to REQUIRED_USE * [QA] Byte-compile XdmfCore.py and Xdmf.py * Thanks to Michael Palimaka <kensington@gentoo.org> for helping to identify the culprit Package-Manager: portage-2.3.0
* sci-libs/cmpfit: Removed EAPI 4 ebuild cmpfit-1.2.ebuildGerhard Bräunlich2016-09-021-39/+0
| | | | | | | Package-Manager: portage-2.2.28 Closes: https://github.com/gentoo/gentoo/pull/2190 Signed-off-by: David Seifert <soap@gentoo.org>