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* sci-libs/pastix: Drop ~alpha keywords, bug #764023Matt Turner2021-07-243-3/+3
| | | | Signed-off-by: Matt Turner <mattst88@gentoo.org>
* sci-libs/shapely: drop oldDennis Lamm2021-07-221-39/+0
| | | | | Signed-off-by: Dennis Lamm <expeditioneer@gentoo.org> Package-Manager: Portage-3.0.20, Repoman-3.0.2
* sci-libs/libspatialindex: drop oldDennis Lamm2021-07-221-33/+0
| | | | | Signed-off-by: Dennis Lamm <expeditioneer@gentoo.org> Package-Manager: Portage-3.0.20, Repoman-3.0.2
* sci-libs/libspatialindex: Stabilize 1.9.3-r1 x86, #802972Sam James2021-07-221-1/+1
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/shapely: Stabilize 1.7.1-r1 x86, #802969Sam James2021-07-221-1/+1
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/libspatialindex: Stabilize 1.9.3-r1 amd64, #802972Sam James2021-07-221-1/+1
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/shapely: Stabilize 1.7.1-r1 amd64, #802969Sam James2021-07-221-1/+1
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/openblas: drop 0.3.16Sam James2021-07-222-199/+0
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/openblas: add 0.3.17Sam James2021-07-222-0/+199
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/hdf5: rekeyword 1.10.5{,-r1} for ~riscvAlex Fan2021-07-212-2/+2
| | | | | | Package-Manager: Portage-3.0.20, Repoman-3.0.2 Signed-off-by: Alex Fan <alexfanqi@yahoo.com> Signed-off-by: Yixun Lan <dlan@gentoo.org>
* sci-libs/parmetis: update homepageAndrew Ammerlaan2021-07-202-2/+2
| | | | | | Closes: https://bugs.gentoo.org/802987 Package-Manager: Portage-3.0.20, Repoman-3.0.3 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* sci-libs/metis: update homepageAndrew Ammerlaan2021-07-202-2/+2
| | | | | | Bug: https://bugs.gentoo.org/802987 Package-Manager: Portage-3.0.20, Repoman-3.0.3 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* sci-libs/hdf5: keyword ~1.10.5 for -riscvMarek Szuba2021-07-192-2/+2
| | | | | | | Independently observed to fail tests by two arch testers. Bugzilla ticket to follow. Signed-off-by: Marek Szuba <marecki@gentoo.org>
* sci-libs/votca-tools: version bumpChristoph Junghans2021-07-183-0/+47
| | | | | Package-Manager: Portage-3.0.20, Repoman-3.0.2 Signed-off-by: Christoph Junghans <junghans@gentoo.org>
* sci-libs/indilib: Keyword 1.9.1-r1 ppc64, #800179Sam James2021-07-181-1/+1
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/libsvm: Stabilize 3.25 ppc64, #800959Sam James2021-07-181-1/+1
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/vtk: PYTHON_MULTI_USEDEP -> PYTHON_USEDEPDavid Seifert2021-07-172-16/+16
| | | | Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/plplot: PYTHON_MULTI_USEDEP -> PYTHON_USEDEPDavid Seifert2021-07-171-3/+3
| | | | Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/cantera: PYTHON_MULTI_USEDEP -> PYTHON_USEDEPDavid Seifert2021-07-171-6/+6
| | | | Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/pastix: update HOMEPAGEMarek Szuba2021-07-161-2/+2
| | | | Signed-off-by: Marek Szuba <marecki@gentoo.org>
* sci-libs/pastix-6.0.3: enable py3.10Marek Szuba2021-07-161-1/+1
| | | | | | | | Using this Python version causes the sandbox to complain once per each Python test - but interestingly enough the tests are able to recover and produce expected results anyway. Without sandbox all is quiet. Signed-off-by: Marek Szuba <marecki@gentoo.org>
* sci-libs/pastix: older METIS versions always used 64-bit intsMarek Szuba2021-07-161-1/+1
| | | | | | | This will be safe to remove once sci-libs/metis-5.1.0-r4 has been removed from the tree. Signed-off-by: Marek Szuba <marecki@gentoo.org>
* sci-libs/pastix: update METIS and Scotch dependenciesMarek Szuba2021-07-161-3/+6
| | | | Signed-off-by: Marek Szuba <marecki@gentoo.org>
* sci-libs/scotch: extend USE=int64 logicMarek Szuba2021-07-161-0/+173
| | | | | | | | | | | | | | It is -DINTSIZE64 that changes the library's integer representation, not -DIDXSIZE64; with only the latter set e.g. sci-libs/pastix[int64,scotch] would still complain about a mismatch. Continue to set the latter for now - according to the docs index size is by default assumed to be equivalent to that of the Scotch integer type, however the relevant preprocessor definitions are rather convoluted so let's play it safe and assume they are _not_ in fact in sync. Signed-off-by: Marek Szuba <marecki@gentoo.org>
* */*: update sci-libs/{,par}metis revdepsMarek Szuba2021-07-1610-23/+26
| | | | | | | | | | | | ParMETIS on the one hand no longer installs bundled METIS and on the other unconditionally depends on MPI. Therefore, only keep it in ebuilds which use MPI themselves and depend on METIS directly otherwise. Note that some of the alleged sci-libs/parmetis revdeps might in fact not use even when they use MPI, as none of these revdeps have actually explicitly requested sci-libs/parmetis[mpi]. Signed-off-by: Marek Szuba <marecki@gentoo.org>
* sci-libs/metis: update sci-libs/parmetis blockerMarek Szuba2021-07-161-1/+1
| | | | | | | Newer versions of parmetis no longer bundle metis so they in fact DEPEND on this package rather than conflict with it. Signed-off-by: Marek Szuba <marecki@gentoo.org>
* sci-libs/metis: support USE="doc double-precision examples int64"Marek Szuba2021-07-162-1/+84
| | | | | | | | USE flags: all of these were implemented (incorrectly in case of the two type switchers, I might add) for the METIS version bundled in sci-libs/parmetis yet not here. Signed-off-by: Marek Szuba <marecki@gentoo.org>
* sci-libs/parmetis: major refactoringMarek Szuba2021-07-163-0/+123
| | | | | | | | | | | | | 1. Update to EAPI 7 and cmake.eclass 2. Unbundle sci-libs/metis 3. Remove IUSE=mpi - with METIS unbundled, settings USE=-mpi effectively turns this package into a metapackage 4. Add USE=fortran requirement to virtual/mpi - without it, libparmetis.so ends up with unresolved symbol MPI_Comm_f2c 5. CMakeFiles are now modified by patches rather than sed - the changes are entirely static so there is no need for the latter Signed-off-by: Marek Szuba <marecki@gentoo.org>
* sci-libs/metis: remove unused fortran-2 inheritMarek Szuba2021-07-161-1/+1
| | | | Signed-off-by: Marek Szuba <marecki@gentoo.org>
* sci-libs/libsvm: x86 stable wrt bug #800959Agostino Sarubbo2021-07-161-1/+1
| | | | | | Package-Manager: Portage-3.0.20, Repoman-3.0.2 RepoMan-Options: --include-arches="x86" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
* sci-libs/libsvm: amd64 stable wrt bug #800959Agostino Sarubbo2021-07-161-1/+1
| | | | | | Package-Manager: Portage-3.0.20, Repoman-3.0.2 RepoMan-Options: --include-arches="amd64" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
* sci-libs/sundials: fix installation of examples on prefixSam James2021-07-163-4/+4
| | | | | Closes: https://bugs.gentoo.org/802369 Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/cdf: remove unused patchesMichael Mair-Keimberger2021-07-152-132/+0
| | | | | | | Closes: https://github.com/gentoo/gentoo/pull/21659 Package-Manager: Portage-3.0.20, Repoman-3.0.3 Signed-off-by: Michael Mair-Keimberger <mmk@levelnine.at> Signed-off-by: Conrad Kostecki <conikost@gentoo.org>
* sci-libs/alglib: remove unused patchConrad Kostecki2021-07-151-16/+0
| | | | | | Closes: https://github.com/gentoo/gentoo/pull/21660 Package-Manager: Portage-3.0.20, Repoman-3.0.3 Signed-off-by: Conrad Kostecki <conikost@gentoo.org>
* sci-libs/dealii: update dependencies of live ebuildMatthias Maier2021-07-151-1/+1
| | | | | Package-Manager: Portage-3.0.20, Repoman-3.0.3 Signed-off-by: Matthias Maier <tamiko@gentoo.org>
* sci-libs/dealii: version bump to 9.3.1Matthias Maier2021-07-152-0/+163
| | | | | Package-Manager: Portage-3.0.20, Repoman-3.0.3 Signed-off-by: Matthias Maier <tamiko@gentoo.org>
* sci-libs/pastix: add 6.0.3, maskedMarek Szuba2021-07-148-2/+772
| | | | | | | | | | The ebuild in principle works but there are several features which for various reasons remain problematic (see the package.use.mask entry), and with this being a new major version chances are not all revdeps will be happy with it (hence the overall mask). Testing very much encouraged! Bug: https://bugs.gentoo.org/751034 Signed-off-by: Marek Szuba <marecki@gentoo.org>
* sci-libs/pastix: keyword 5.2.3 for ~riscv, update EAPI 6 -> 7Marek Szuba2021-07-141-5/+5
| | | | | | | Builds and installs fine, unfortunately had to disable the tests due to it attempting to write files to / (see Bug #619316). Signed-off-by: Marek Szuba <marecki@gentoo.org>
* sci-libs/adolc: keyword 2.7.2 for ~riscvMarek Szuba2021-07-141-2/+2
| | | | Signed-off-by: Marek Szuba <marecki@gentoo.org>
* sci-libs/superlu: keyword 5.2.2 for ~riscvMarek Szuba2021-07-141-1/+1
| | | | Signed-off-by: Marek Szuba <marecki@gentoo.org>
* sci-libs/colpack: keyword 1.0.10 for ~riscvMarek Szuba2021-07-141-3/+3
| | | | Signed-off-by: Marek Szuba <marecki@gentoo.org>
* sci-libs/spqr: keyword 2.0.9 for ~riscvMarek Szuba2021-07-141-2/+2
| | | | Signed-off-by: Marek Szuba <marecki@gentoo.org>
* sci-libs/scotch: keyword 6.1.0 for ~riscvMarek Szuba2021-07-141-1/+1
| | | | Signed-off-by: Marek Szuba <marecki@gentoo.org>
* sci-libs/umfpack: keyword 5.7.9 for ~riscvMarek Szuba2021-07-141-1/+1
| | | | Signed-off-by: Marek Szuba <marecki@gentoo.org>
* sci-libs/cholmod: keyword 3.0.14 for ~riscvMarek Szuba2021-07-141-1/+1
| | | | Signed-off-by: Marek Szuba <marecki@gentoo.org>
* sci-libs/metis: keyword 5.1.0-r4 for ~riscvMarek Szuba2021-07-141-3/+3
| | | | Signed-off-by: Marek Szuba <marecki@gentoo.org>
* sci-libs/ccolamd: keyword 2.9.6 for ~riscvMarek Szuba2021-07-141-1/+1
| | | | Signed-off-by: Marek Szuba <marecki@gentoo.org>
* sci-libs/camd: keyword 2.4.6-r1 for ~riscvMarek Szuba2021-07-141-1/+1
| | | | Signed-off-by: Marek Szuba <marecki@gentoo.org>
* sci-libs/colamd: keyword 2.9.6 for ~riscvMarek Szuba2021-07-141-1/+1
| | | | Signed-off-by: Marek Szuba <marecki@gentoo.org>
* sci-libs/amd: keyword 2.4.6-r1 for ~riscvMarek Szuba2021-07-141-1/+1
| | | | Signed-off-by: Marek Szuba <marecki@gentoo.org>