GitWeb
Get Gentoo!
gentoo.org sites
gentoo.org
Wiki
Bugs
Forums
Packages
Planet
Archives
Sources
Infra Status
Home
Gentoo Repository
Repositories
Projects
Developer Overlays
User Overlays
Data
Websites
index
:
proj/sci.git
ambertools
master
random
random2
wxmacmolplt
Gentoo Science Overlay
sci <sci@gentoo.org>
about
summary
refs
log
tree
commit
diff
log msg
author
committer
range
path:
root
/
sci-biology
Mode
Name
Size
d---------
ABI-connectivity-data
199
log
plain
d---------
ABI-expression-data
134
log
plain
d---------
ANGLE-bin
132
log
plain
d---------
AlignGraph
90
log
plain
d---------
BBmap
122
log
plain
d---------
BRAKER
123
log
plain
d---------
BRANCH
86
log
plain
d---------
BlastToSam
89
log
plain
d---------
CAT
150
log
plain
d---------
FLASH
123
log
plain
d---------
Fastaq
124
log
plain
d---------
GAL
162
log
plain
d---------
IMAGE
122
log
plain
d---------
KING
121
log
plain
d---------
KaKs_Calculator
216
log
plain
d---------
LINKS
122
log
plain
d---------
MaSuRCA
124
log
plain
d---------
MeV
120
log
plain
d---------
MochiView
125
log
plain
d---------
MuSeqBox
128
log
plain
d---------
NGSEPcore-bin
130
log
plain
d---------
NGSEPcore
126
log
plain
d---------
ONTO-PERL
125
log
plain
d---------
ParaAT
121
log
plain
d---------
RAILS
122
log
plain
d---------
RSeQC
125
log
plain
d---------
Rcorrector
159
log
plain
d---------
SEECER
208
log
plain
d---------
SPAdes
124
log
plain
d---------
SSAKE
122
log
plain
d---------
SnpEff
122
log
plain
d---------
SolexaQA
127
log
plain
d---------
TransDecoder
161
log
plain
d---------
Trinotate
126
log
plain
d---------
VarScan-bin
128
log
plain
d---------
VarScan
124
log
plain
d---------
VelvetOptimiser
132
log
plain
d---------
YASRA
121
log
plain
d---------
abacas
123
log
plain
d---------
act-bin
125
log
plain
d---------
afni
249
log
plain
d---------
aghermann
129
log
plain
d---------
align_to_scf
160
log
plain
d---------
angsd
122
log
plain
d---------
ants
201
log
plain
d---------
arcs
121
log
plain
d---------
assembly-stats
94
log
plain
d---------
bam-readcount
183
log
plain
d---------
bambus
157
log
plain
d---------
bamql
199
log
plain
d---------
barrnap
122
log
plain
d---------
beagle
121
log
plain
d---------
beaglecall
130
log
plain
d---------
bedops
204
log
plain
d---------
behaviopy
124
log
plain
d---------
bidsschematools
247
log
plain
d---------
biobambam2
179
log
plain
d---------
bismark
125
log
plain
d---------
brat
121
log
plain
d---------
brat_bw
124
log
plain
d---------
brat_nova
129
log
plain
d---------
bru2nii
131
log
plain
d---------
bruker2nifti
129
log
plain
d---------
btl_bloomfilter
132
log
plain
d---------
bx-python
225
log
plain
d---------
canu
121
log
plain
d---------
cast-bin
128
log
plain
d---------
cdbfasta
123
log
plain
d---------
chiron
125
log
plain
d---------
cluster
155
log
plain
d---------
clview
121
log
plain
d---------
cnrun
125
log
plain
d---------
codonw
126
log
plain
d---------
conform-gt
126
log
plain
d---------
coral
122
log
plain
d---------
cross_genome
132
log
plain
d---------
cutadapt
203
log
plain
d---------
dargcc_bidsdata
130
log
plain
d---------
dcm2niix
220
log
plain
d---------
dcmstack
123
log
plain
d---------
deeptools-intervals
136
log
plain
d---------
deeptools
176
log
plain
d---------
diamond
124
log
plain
d---------
dipy
121
log
plain
d---------
drlfom_bidsdata
130
log
plain
d---------
edena
125
log
plain
d---------
epga
84
log
plain
d---------
erpin
153
log
plain
d---------
exonerate-gff3
94
log
plain
d---------
fastdnaml
130
log
plain
d---------
fastqc
124
log
plain
d---------
ffindex
122
log
plain
d---------
flexbar
124
log
plain
d---------
freebayes
126
log
plain
d---------
fsa
121
log
plain
d---------
fsl
196
log
plain
d---------
gemini
124
log
plain
d---------
genepop
122
log
plain
d---------
genomeview-bin
130
log
plain
d---------
germline
125
log
plain
d---------
gffcompare
160
log
plain
d---------
gffread
125
log
plain
d---------
gffutils
176
log
plain
d---------
glean
122
log
plain
d---------
grabix
86
log
plain
d---------
graf-bin
123
log
plain
d---------
grappa
153
log
plain
d---------
hexamer
127
log
plain
d---------
hisat2
155
log
plain
d---------
idba
165
log
plain
d---------
imagej
123
log
plain
d---------
irsabi_bidsdata
130
log
plain
d---------
jannovar-bin
128
log
plain
d---------
jellyfish
177
log
plain
d---------
jtreeview-bin
130
log
plain
d---------
karect
121
log
plain
d---------
kat
195
log
plain
d---------
khmer
122
log
plain
d---------
kmergenie
127
log
plain
d---------
kraken
173
log
plain
d---------
last
120
log
plain
d---------
lastz
156
log
plain
d---------
lemur-brain-atlas
132
log
plain
d---------
libBigWig
175
log
plain
d---------
lighter
171
log
plain
d---------
longstitch
127
log
plain
d---------
lucy
120
log
plain
d---------
lumpy-sv
125
log
plain
d---------
mappy
121
log
plain
d---------
megahit
124
log
plain
d---------
merlin
123
log
plain
d---------
minced
123
log
plain
d---------
minimap2
124
log
plain
d---------
mip-scaffolder
129
log
plain
d---------
miranda
123
log
plain
d---------
mmseqs2
158
log
plain
d---------
mouse-brain-templates
138
log
plain
d---------
mreps
123
log
plain
d---------
mrfast
125
log
plain
d---------
msautil
125
log
plain
d---------
nanopolish
90
log
plain
d---------
ncbi-blast+
371
log
plain
d---------
ncbi-genome-download
137
log
plain
d---------
ncbi-tools++
270
log
plain
d---------
ncbi-vdb
126
log
plain
d---------
neuroconv
126
log
plain
d---------
nextclip
125
log
plain
d---------
ngs
121
log
plain
d---------
nilearn
204
log
plain
d---------
nitime
167
log
plain
d---------
nrcl
154
log
plain
d---------
ntCard
169
log
plain
d---------
nwalign3
125
log
plain
d---------
nxtrim
123
log
plain
d---------
open-ephys-gui
385
log
plain
d---------
opfvta_bidsdata
130
log
plain
d---------
pairagon
123
log
plain
d---------
parafly
124
log
plain
d---------
pbbam
122
log
plain
d---------
pbcopper
125
log
plain
d---------
perga
85
log
plain
d---------
perlprimer
128
log
plain
d---------
pileup
121
log
plain
d---------
polyphen
125
log
plain
d---------
portrait
123
log
plain
d---------
prinseq-lite
130
log
plain
d---------
proda
152
log
plain
d---------
prokka
124
log
plain
d---------
proovread
176
log
plain
d---------
psx
118
log
plain
d---------
pybedtools
178
log
plain
d---------
pyfaidx
176
log
plain
d---------
pysamstats
127
log
plain
d---------
quast
122
log
plain
d---------
quicktree
124
log
plain
d---------
rat-brain-templates
134
log
plain
d---------
rnaplex
154
log
plain
d---------
roiextractors
130
log
plain
d---------
rtg-tools
125
log
plain
d---------
ruffus
123
log
plain
d---------
sabre
85
log
plain
d---------
samri
213
log
plain
d---------
samri_bidsdata
129
log
plain
d---------
samri_bindata
128
log
plain
d---------
samstat
156
log
plain
d---------
scan_for_matches
136
log
plain
d---------
screed
123
log
plain
d---------
scythe
86
log
plain
d---------
seqtk
152
log
plain
d---------
seqtools
126
log
plain
d---------
sff_dump
124
log
plain
d---------
sga
83
log
plain
d---------
sickle
168
log
plain
d---------
skewer-bin
127
log
plain
d---------
smalt-bin
126
log
plain
d---------
smalt
122
log
plain
d---------
snap
156
log
plain
d---------
snpomatic
124
log
plain
d---------
spm
123
log
plain
d---------
sra-tools
159
log
plain
d---------
ssaha2-bin
130
log
plain
d---------
stacks
154
log
plain
d---------
stringtie
126
log
plain
d---------
subread
124
log
plain
d---------
swissknife
126
log
plain
d---------
tabixpp
124
log
plain
d---------
tagdust
159
log
plain
d---------
tigmint
127
log
plain
d---------
tigr-foundation-libs
170
log
plain
d---------
trans-abyss
128
log
plain
d---------
trf-bin
155
log
plain
d---------
trim_galore
128
log
plain
d---------
trimmomatic
127
log
plain
d---------
trinityrnaseq
163
log
plain
d---------
twinscan
128
log
plain
d---------
ugene
121
log
plain
d---------
vague-bin
158
log
plain
d---------
vcflib
123
log
plain
d---------
verifyBamID
128
log
plain
d---------
vt
82
log
plain
d---------
weblogo
124
log
plain
d---------
wgs_tools
125
log
plain
d---------
yaha
116
log
plain
d---------
zmap
122
log
plain
d---------
zmsort
156
log
plain