/sci-biology/
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ABI-connectivity-data
ABI-expression-data
ANGLE-bin
AlignGraph
BBmap
BEP032tools
BRAKER
BRANCH
CAT
FLASH
Fastaq
GAL
IMAGE
KING
KaKs_Calculator
LINKS
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MeV
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MuSeqBox
NGSEPcore-bin
NGSEPcore
ONTO-PERL
ParaAT
RAILS
Rcorrector
SEECER
SPAdes
SSAKE
SnpEff
SolexaQA
TransDecoder
VarScan-bin
VarScan
VelvetOptimiser
YASRA
abacas
act-bin
afni-datasets
afni
aghermann
align_to_scf
angsd
ants
arcs
assembly-stats
bam-readcount
bambus
bamql
barrnap
beagle
beaglecall
bedops
bidsschematools
biobambam2
bismark
brat
brat_bw
brat_nova
brkraw
bru2nii
bruker2nifti
btl_bloomfilter
bx-python
cast-bin
cdbfasta
cluster
cnrun
codonw
conform-gt
coral
cross_genome
dargcc_bidsdata
dcm2niix
dcmstack
deeptools-intervals
deeptools
diamond
dipy
drlfom_bidsdata
edena
epga
erpin
exonerate-gff3
fastdnaml
fastp
fastqc
ffindex
flexbar
freebayes
fsa
fsl
genepop
genomeview-bin
germline
gffcompare
gffread
gffutils
glean
grabix
graf-bin
grappa
hexamer
hisat2
idba
imagej
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jannovar-bin
jellyfish
jtreeview-bin
karect
lastz
lemur-brain-atlas
libBigWig
lighter
longstitch
lucy
lumpy-sv
mappy
megahit
merlin
minced
minimap2
mip-scaffolder
miranda
mmseqs2
mouse-brain-templates
mreps
mrfast
msautil
multiqc
nanopolish
ncbi-vdb
neuroconv
nextclip
ngs
nilearn
nitime
nrcl
ntCard
nxtrim
open-ephys-gui
opfvta_bidsdata
pairagon
parafly
pbbam
pbcopper
perga
perlprimer
pileup
portrait
prinseq-lite
proda
psx
pybedtools
pyfaidx
quicktree
rat-brain-templates
rnaplex
roiextractors
sabre
samri
samri_bidsdata
samri_bindata
samstat
scan_for_matches
scythe
seqtk
seqtools
sff_dump
sga
sickle
skewer-bin
smalt-bin
smalt
snap
snapgene-viewer
snpomatic
spm
sra-tools
ssaha2-bin
stacks
stringtie
subread
swissknife
tabixpp
tagdust
tigmint
tigr-foundation-libs
trf-bin
trimmomatic
trinityrnaseq
twinscan
ugene
vague-bin
vcflib
verifyBamID
vt
wgs_tools
yaha
zmap
zmsort