# Copyright 1999-2010 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 # $Header: /var/cvsroot/gentoo-x86/sci-libs/cctbx/cctbx-2010.03.29.2334-r1.ebuild,v 1.2 2010/09/12 12:26:04 jlec Exp $ EAPI="3" PYTHON_DEPEND="2" inherit eutils python toolchain-funcs MY_PV="${PV//./_}" DESCRIPTION="Computational Crystallography Toolbox" HOMEPAGE="http://cctbx.sourceforge.net/" SRC_URI="http://cci.lbl.gov/cctbx_build/results/${MY_PV}/${PN}_bundle.tar.gz -> ${P}.tar.gz" LICENSE="cctbx-2.0" SLOT="0" KEYWORDS="amd64 ~x86 ~amd64-linux ~x86-linux" IUSE="+minimal openmp threads" RDEPEND=" >dev-libs/boost-1.39 sci-libs/fftw !minimal? ( sci-chemistry/cns sci-chemistry/shelx )" DEPEND="${RDEPEND} >=dev-util/scons-1.2" S="${WORKDIR}" MY_S="${WORKDIR}"/cctbx_sources MY_B="${WORKDIR}"/cctbx_build pkg_setup() { if use openmp && ! tc-has-openmp; then ewarn "You are using gcc and OpenMP is only available with gcc >= 4.2 and icc" ewarn "If you want to build ${PN} with OpenMP, abort now," ewarn "and switch CC to an OpenMP capable compiler" fi python_set_active_version 2 } src_prepare() { local opts local optsld epatch "${FILESDIR}"/${PV}-tst_server.py.patch rm -rf "${MY_S}/scons" mkdir -p "${MY_S}"/scons/src/ "${MY_S}/boost" ln -sf "${EPREFIX}"/usr/$(get_libdir)/scons-* "${MY_S}"/scons/src/engine || die # Get CXXFLAGS in format suitable for substitition into SConscript for i in ${CXXFLAGS}; do opts="${opts} \"${i}\"," done # Strip off the last comma opts=${opts%,} # Fix CXXFLAGS sed -i \ -e "s:\"-O3\", \"-ffast-math\":${opts}:g" \ ${MY_S}/libtbx/SConscript # Get LDFLAGS in format suitable for substitition into SConscript for i in ${LDFLAGS}; do optsld="${optsld} \"${i}\"," done optsld=${optsld%,} # Fix LDFLAGS which should be as-needed ready sed -i \ -e "s:\"-shared\":\"-shared\", ${optsld}:g" \ ${MY_S}/libtbx/SConscript } src_configure() { local compiler local myconf myconf="${MY_S}/libtbx/configure.py" # Get compiler in the right way compiler=$(expr match "$(tc-getCC)" '.*\([a-z]cc\)') myconf="${myconf} --compiler=${compiler}" # Precompiling python scripts. It is done in upstreams install script. # Perhaps use python_mod_optimize, but as this script works we should stick to it. $(PYTHON -a) "${MY_S}/libtbx/command_line/py_compile_all.py" # Additional USE flag usage check_use openmp myconf="${myconf} --enable-openmp-if-possible=${USE_openmp}" use threads && USEthreads="--enable-boost-threads" && \ ewarn "If using boost threads openmp support is disabled" myconf="${myconf} ${USE_threads} --scan-boost" mkdir "${MY_B}" && myconf="${myconf} --current_working_directory=${MY_B}" cd "${MY_B}" myconf="${myconf} --build=release fftw3tbx rstbx smtbx mmtbx clipper fable" einfo "configuring with ${python} ${myconf}" $(PYTHON -a) ${myconf} \ || die "configure failed" } src_compile() { local makeopts_exp cd "${MY_B}" makeopts_exp=${MAKEOPTS/j/j } makeopts_exp=${makeopts_exp%-l[0-9]*} source setpaths_all.sh einfo "compiling with libtbx.scons ${makeopts_exp}" libtbx.scons ${makeopts_exp} .|| die "make failed" } src_test(){ source "${MY_B}"/setpaths_all.sh libtbx.python $(libtbx.show_dist_paths boost_adaptbx)/tests/tst_rational.py && \ libtbx.python ${SCITBX_DIST}/run_tests.py ${MAKEOPTS_EXP} && \ libtbx.python ${CCTBX_DIST}/run_tests.py ${MAKEOPTS_EXP} \ || die "test failed" } src_install(){ # This is what Bill Scott does in the fink package. Do we need this as well? # -e "s:prepend:append:g" \ find cctbx_build/ -type f \( -name "*.py" -o -name "*sh" \) -exec \ sed -e "s:${MY_S}:${EPREFIX}/usr/$(get_libdir)/cctbx/cctbx_sources:g" \ -e "s:${MY_B}:${EPREFIX}/usr/$(get_libdir)/cctbx/cctbx_build:g" \ -i '{}' \; || die "Fail to correct path" ebegin "removing unnessary files" rm -r "${S}"/cctbx_sources/{boost,scons} || die "failed to remove uneeded scons" find "${S}" -type f -name "*conftest*" -delete || die "failed to remove uneeded *.o" find "${S}" -type f -name "*.o" -delete || die "failed to remove uneeded *.o" find "${S}" -type f -name "*.c" -delete || die "failed to remove uneeded *.c" find "${S}" -type f -name "*.f" -delete || die "failed to remove uneeded *.c" find "${S}" -type f -name "*.cpp" -delete || die "failed to remove uneeded *.cpp" find "${S}" -type f -name "*.pyc" -delete || die "failed to remove uneeded *.pyc" find "${S}" -type d -empty -delete || die eend insinto /usr/$(get_libdir)/${PN} doins -r cctbx_sources cctbx_build || die # fperms cannot handle wildcards chmod 775 "${ED}"/usr/$(get_libdir)/${PN}/cctbx_build/*sh && \ chmod 775 "${ED}"/usr/$(get_libdir)/${PN}/cctbx_build/lib/* && \ chmod 775 "${ED}"/usr/$(get_libdir)/${PN}/cctbx_build/scitbx/array_family/* && \ chmod 775 "${ED}"/usr/$(get_libdir)/${PN}/cctbx_build/scitbx/serialization/* && \ chmod 775 "${ED}"/usr/$(get_libdir)/${PN}/cctbx_build/scitbx/error/* && \ chmod 775 "${ED}"/usr/$(get_libdir)/${PN}/cctbx_build/scitbx/fftpack/timing/* && \ chmod 775 "${ED}"/usr/$(get_libdir)/${PN}/cctbx_build/scitbx/lbfgs/* && \ chmod 775 "${ED}"/usr/$(get_libdir)/${PN}/cctbx_build/chiltbx/handle_test && \ chmod 775 "${ED}"/usr/$(get_libdir)/${PN}/cctbx_build/bin/* || \ die insinto /etc/profile.d/ newins "${MY_B}"/setpaths.sh 30cctbx.sh || die newins "${MY_B}"/setpaths.csh 30cctbx.csh || die cat >> "${T}"/30cctbx <<- EOF LDPATH="${EPREFIX}/usr/$(get_libdir)/${PN}/cctbx_build/lib" EOF doenvd "${T}"/30cctbx || die } pkg_postinst () { python_need_rebuild python_mod_optimize /usr/$(get_libdir)/${PN}/cctbx_sources } pkg_postrm () { python_mod_cleanup /usr/$(get_libdir)/${PN}/cctbx_sources } check_use() { for var in $@; do if use ${var}; then printf -v "USE_$var" True else printf -v "USE_$var" False fi shift done }