# Copyright 1999-2009 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 # $Header: /var/cvsroot/gentoo-x86/sci-chemistry/gamess/gamess-20090112.3.ebuild,v 1.1 2009/10/23 02:56:50 markusle Exp $ inherit eutils toolchain-funcs fortran flag-o-matic DESCRIPTION="A powerful quantum chemistry package" LICENSE="gamess" HOMEPAGE="http://www.msg.chem.iastate.edu/GAMESS/GAMESS.html" SRC_URI=" ${P}.tar.gz qmmm-tinker? ( tinker.tar.Z )" SLOT="0" # NOTE: PLEASE do not stabilize gamess. It does not make sense # since the tarball has fetch restrictions and upstream only # provides the latest version. In other words: As soon as a # new version comes out the stable version will be useless since # users can not get at the tarball any more. KEYWORDS="~amd64 ~ppc ~x86" IUSE="hardened qmmm-tinker" RESTRICT="fetch" DEPEND="app-shells/tcsh hardened? ( sys-apps/paxctl ) virtual/blas" RDEPEND="${DEPEND} net-misc/openssh" S="${WORKDIR}/${PN}" GAMESS_DOWNLOAD="http://www.msg.ameslab.gov/GAMESS/License_Agreement.html" GAMESS_VERSION="12 JAN 2009 (R3)" FORTRAN="ifc g77 gfortran" pkg_nofetch() { echo elog "Please download ${PN}-current.tar.gz from" elog "${GAMESS_DOWNLOAD}." elog "Be sure to select the version ${GAMESS_VERSION} tarball!!" elog "Then move the tarball to" elog "${DISTDIR}/${P}.tar.gz" if use qmmm-tinker ; then elog "Also download http://www.msg.ameslab.gov/GAMESS/tinker.tar.Z" elog "and place tinker.tar.Z to ${DISTDIR}" fi echo } pkg_setup() { fortran_pkg_setup # currently amd64 is only supported with gfortran if [[ "${ARCH}" == "amd64" ]] && [[ "${FORTRANC}" != "gfortran" ]]; then die "You will need gfortran to compile gamess on amd64" fi if use qmmm-tinker; then einfo "By default MM subsistem is restricted to 1000 atoms" einfo "if you want larger MM subsystems then you should set" einfo "QMMM_GAMESS_MAXMM variable to needed value in your make.conf" ebeep 5 fi } src_unpack() { unpack ${A} if use qmmm-tinker; then mv tinker gamess/ || die "failed to move tinker directory" fi # apply LINUX-arch patches to gamess makesfiles epatch "${FILESDIR}"/${PN}-20090112.1.gentoo.patch # select arch # NOTE: please leave lked alone; it should be good as is!! cd "${S}" local active_arch; if [[ "${ARCH}" == "amd64" ]]; then active_arch="linux64"; else active_arch="linux32"; fi sed -e "s:gentoo-target:${active_arch}:" \ -i comp compall ddi/compddi \ || die "Failed to select proper architecure" # for hardened-gcc let't turn off ssp, since it breakes # a few routines if use hardened && [[ "${FORTRANC}" = "g77" ]]; then FFLAGS="${FFLAGS} -fno-stack-protector-all" fi # enable NEO sed -e "s:NEO=false:NEO=true:" -i compall lked || \ die "Failed to enable NEO code" # enable GAMESS-qmmm if use qmmm-tinker; then sed -e "s:TINKER=false:TINKER=true:" -i compall lked || \ die "Failed to enable TINKER code" if [ "x$QMMM_GAMESS_MAXMM" == "x" ]; then einfo "No QMMM_GAMESS_MAXMM set. Using default value = 1000" else einfo "Setting QMMM_GAMESS_MAXMM to $QMMM_GAMESS_MAXMM" sed -e "s:maxatm=1000:maxatm=$QMMM_GAMESS_MAXMM:g" \ -i tinker/sizes.i \ || die "Setting QMMM_GAMESS_MAXMM failed" sed -e "s:MAXATM=1000:MAXATM=$QMMM_GAMESS_MAXMM:g" \ -i source/inputb.src \ || die "Setting QMMM_GAMESS_MAXMM failed" fi fi # greate proper activate sourcefile cp "./tools/actvte.code" "./tools/actvte.f" || \ die "Failed to create actvte.f" sed -e "s/^\*UNX/ /" -i "./tools/actvte.f" || \ die "Failed to perform UNX substitutions in actvte.f" # fix GAMESS' compall script to use proper CC sed -e "s|\$CCOMP -c \$extraflags source/zunix.c|$(tc-getCC) -c \$extraflags source/zunix.c|" \ -i compall || die "Failed setting up compall script" # insert proper FFLAGS into GAMESS' comp makefile # in case we're using ifc let's strip all the gcc # specific stuff if [[ "${FORTRANC}" == "ifc" ]]; then sed -e "s/gentoo-OPT = '-O2'/OPT = '${FFLAGS} -quiet'/" \ -e "s/gentoo-g77/${FORTRANC}/" \ -i comp || die "Failed setting up comp script" elif ! use x86; then sed -e "s/-malign-double //" \ -e "s/gentoo-OPT = '-O2'/OPT = '${FFLAGS}'/" \ -e "s/gentoo-g77/${FORTRANC}/" \ -i comp || die "Failed setting up comp script" else sed -e "s/gentoo-OPT = '-O2'/OPT = '${FFLAGS}'/" \ -e "s/gentoo-g77/${FORTRANC}/" \ -i comp || die "Failed setting up comp script" fi # fix up GAMESS' linker script; sed -e "s/gentoo-g77/${FORTRANC}/" \ -e "s/gentoo-LDOPTS=' '/LDOPTS='${LDFLAGS}'/" \ -i lked || die "Failed setting up lked script" # fix up GAMESS' ddi TCP/IP socket build sed -e "s/gentoo-CC = 'gcc'/CC = '$(tc-getCC)'/" \ -e "s/gentoo-g77/${FORTRANC}/" \ -i ddi/compddi || die "Failed setting up compddi script" # fix up the checker scripts for gamess tests sed -e "s:set GMSPATH:#set GMSPATH:g" \ -e "s:\$GMSPATH/tools/checktst:.:g" \ -i tools/checktst/checktst } src_compile() { # build actvte cd "${S}"/tools "${FORTRANC}" -o actvte.x actvte.f || \ die "Failed to compile actvte.x" # for hardened (PAX) users and ifc we need to turn # MPROTECT off if [[ "${FORTRANC}" == "ifc" ]] && use hardened; then /sbin/paxctl -PemRxS actvte.x 2> /dev/null || \ die "paxctl failed on actvte.x" fi # build gamess cd "${S}" ./compall || die "compall failed" # build the ddi TCP/IP socket stuff cd ${S}/"ddi" ./compddi || die "compddi failed" # finally, link it all together cd "${S}" ./lked || die "lked failed" # for hardened (PAX) users and ifc we need to turn # MPROTECT off if [[ "${FORTRANC}" == "ifc" ]] && use hardened; then /sbin/paxctl -PemRxS ${PN}.00.x 2> /dev/null || \ die "paxctl failed on actvte.x" fi } src_install() { # the executables dobin ${PN}.00.x ddi/ddikick.x rungms \ || die "Failed installing binaries" # the docs dodoc *.DOC qmnuc/*.DOC || die "Failed installing docs" # install ericftm insinto /usr/share/${PN}/ericfmt doins ericfmt.dat || die "Failed installing ericfmt.dat" # install mcpdata insinto /usr/share/${PN}/mcpdata doins mcpdata/* || die "Failed installing mcpdata" # install tinker params in case of qmmm if use qmmm-tinker ; then dodoc tinker/simomm.doc || die "Failed installing docs" insinto /usr/share/${PN} doins -r tinker/params || die "Failed to install Tinker params" fi # install the tests the user should run, and # fix up the runscript; also grab a copy of rungms # so the user is ready to run the tests insinto /usr/share/${PN}/tests insopts -m0644 doins tests/* || die "Failed installing tests" insopts -m0744 doins runall || die "Failed installing tests" doins tools/checktst/checktst tools/checktst/chkabs || \ die "Failed to install main test checker" doins tools/checktst/exam* || \ die "Failed to install individual test files" insinto /usr/share/${PN}/neotests insopts -m0644 doins -r qmnuc/neotests/* || die "Failed to install NEO tests" } pkg_postinst() { echo einfo "Before you use GAMESS for any serious work you HAVE" einfo "to run the supplied test files located in" einfo "/usr/share/gamess/tests and check them thoroughly." einfo "Otherwise all scientific publications resulting from" einfo "your GAMESS runs should be immediately rejected :)" einfo "To do so copy the content of /usr/share/gamess/tests" einfo "to some temporary location and execute './runall'. " einfo "Then run the checktst script in the same directory to" einfo "validate the tests." einfo "Please consult TEST.DOC and the other docs!" if [[ "${FORTRANC}" == "ifc" ]]; then echo ewarn "IMPORTANT NOTE: We STRONGLY recommend to stay away" ewarn "from ifc-9.0 for now and use the ifc-8.1 series of" ewarn "compilers UNLESS you can run through ALL of the " ewarn "test cases (see above) successfully." fi echo einfo "If you want to run on more than a single CPU" einfo "you will have to acquaint yourself with the way GAMESS" einfo "does multiprocessor runs and adjust rungms according to" einfo "your target network architecture." echo }