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* Version bump, remove old, add git depAndrey Kislyuk2012-09-301-11/+9
* Version bump, remove old, add git depAndrey Kislyuk2012-09-303-47/+10
* QA_DT_HASH (old/deprecated) -> QA_FLAGS_IGNORED (new hotness).Mike Frysinger2012-09-241-12/+22
* QA_DT_HASH (old/deprecated) -> QA_FLAGS_IGNORED (new hotness).Mike Frysinger2012-09-243-6/+10
* Stable for amd64, wrt bug #430524Agostino Sarubbo2012-09-141-16/+6
* Stable for amd64, wrt bug #430524Agostino Sarubbo2012-09-142-5/+8
* Stable for amd64, wrt bug #432366Agostino Sarubbo2012-09-141-13/+2
* Stable for amd64, wrt bug #432366Agostino Sarubbo2012-09-142-3/+6
* sci-biology/seaview: Add missing deps, #432366Justin Lecher2012-09-141-7/+7
* sci-biology/seaview: Add missing deps, #432366Justin Lecher2012-09-144-4/+14
* sci-biology/allpaths: Respect CXXFLAGSJustin Lecher2012-08-301-5/+5
* sci-biology/allpaths: Respect CXXFLAGSJustin Lecher2012-08-302-2/+13
* sci-biology/allpaths: Fix for gcc-4.7Justin Lecher2012-08-301-9/+21
* sci-biology/allpaths: Fix for gcc-4.7Justin Lecher2012-08-303-17/+137
* sci-biology/meme: Version Bump; respect CFLAGS, #430774Justin Lecher2012-08-261-16/+20
* sci-biology/meme: Version Bump; respect CFLAGS, #430774Justin Lecher2012-08-263-2/+221
* sci-biology/seaview: Version Bump; Drop overlinking, #431074Justin Lecher2012-08-261-10/+10
* sci-biology/seaview: Version Bump; Drop overlinking, #431074Justin Lecher2012-08-264-33/+62
* sci-biology/recon: Respect CFLAGS and CC, #432660Justin Lecher2012-08-261-10/+13
* sci-biology/recon: Respect CFLAGS and CC, #432660Justin Lecher2012-08-263-2/+71
* sci-biology/arb: Version BUmp; add fix for gcc-4.7, #431228Justin Lecher2012-08-141-17/+22
* sci-biology/arb: Version BUmp; add fix for gcc-4.7, #431228Justin Lecher2012-08-144-5/+107
* sci-biology/mothur: Version BUmp; fix for buffer overflows, #431258Justin Lecher2012-08-141-12/+19
* sci-biology/mothur: Version BUmp; fix for buffer overflows, #431258Justin Lecher2012-08-148-13/+340
* sci-biology/uchime: New additionJustin Lecher2012-08-141-2/+13
* sci-biology/uchime: New additionJustin Lecher2012-08-145-0/+65
* sci-biology/rnaview: Respect CFLAGS, #429536; Bump to EAPI=4Justin Lecher2012-08-031-7/+19
* sci-biology/rnaview: Respect CFLAGS, #429536; Bump to EAPI=4Justin Lecher2012-08-033-36/+93
* sci-biology/tree-puzzle: Mask stupid test, which fails due to precision reach...Justin Lecher2012-08-011-8/+9
* sci-biology/tree-puzzle: Mask stupid test, which fails due to precision reach...Justin Lecher2012-08-013-3/+30
* sci-biology/finchtv: Use QA_PREBUILT for binary packagesJustin Lecher2012-07-241-9/+10
* sci-biology/finchtv: Use QA_PREBUILT for binary packagesJustin Lecher2012-07-243-11/+16
* Remove packagePacho Ramos2012-07-214-118/+0
* sci-biology/primer3: Version BUmpJustin Lecher2012-07-191-9/+22
* sci-biology/primer3: Version BUmpJustin Lecher2012-07-193-10/+62
* sci-biology/tophat: Version BUmp; do parallel builds; handle debug buildJustin Lecher2012-07-191-12/+16
* sci-biology/tophat: Version BUmp; do parallel builds; handle debug buildJustin Lecher2012-07-195-14/+174
* sci-biology/vcftools: Version BUmp, fix build systemJustin Lecher2012-07-191-9/+13
* sci-biology/vcftools: Version BUmp, fix build systemJustin Lecher2012-07-193-1/+104
* sci-biology/goby-cpp: Version Bump, handle static-libsJustin Lecher2012-07-191-11/+14
* sci-biology/goby-cpp: Version Bump, handle static-libsJustin Lecher2012-07-192-1/+38
* Fix broken Manifest entry for infernal-1.0.2-perl-5.16.patch.Zac Medico2012-07-161-5/+4
* sci-biology/infernal: Cleaned oldJustin Lecher2012-07-151-5/+4
* sci-biology/infernal: Cleaned oldJustin Lecher2012-07-152-31/+4
* sci-biology/infernal: Fix cvs updates of commiter names in patches, #426588Justin Lecher2012-07-151-13/+13
* sci-biology/infernal: Fix cvs updates of commiter names in patches, #426588Justin Lecher2012-07-152-8/+16
* sci-biology/psipred: Cleaned SRC_URIJustin Lecher2012-07-111-4/+15
* sci-biology/psipred: Cleaned SRC_URIJustin Lecher2012-07-112-5/+7
* add missing test to IUSEMichael Sterrett2012-07-111-14/+3
* add missing test to IUSEMichael Sterrett2012-07-113-5/+9