diff options
author | Olivier Fisette <ribosome@gentoo.org> | 2005-07-08 01:42:33 +0000 |
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committer | Olivier Fisette <ribosome@gentoo.org> | 2005-07-08 01:42:33 +0000 |
commit | 215f328fa4a56f174d12e76c9ac7deb9bd8f9a08 (patch) | |
tree | a0ccfe1beff50c95b6731c04c416bfc3182b4125 /sci-biology | |
parent | Stable on sparc (diff) | |
download | gentoo-2-215f328fa4a56f174d12e76c9ac7deb9bd8f9a08.tar.gz gentoo-2-215f328fa4a56f174d12e76c9ac7deb9bd8f9a08.tar.bz2 gentoo-2-215f328fa4a56f174d12e76c9ac7deb9bd8f9a08.zip |
New version: 507. Added 506 to x86.
(Portage version: 2.0.51.19)
Diffstat (limited to 'sci-biology')
-rw-r--r-- | sci-biology/rebase/ChangeLog | 8 | ||||
-rw-r--r-- | sci-biology/rebase/Manifest | 12 | ||||
-rw-r--r-- | sci-biology/rebase/files/digest-rebase-507 | 1 | ||||
-rw-r--r-- | sci-biology/rebase/rebase-506.ebuild | 4 | ||||
-rw-r--r-- | sci-biology/rebase/rebase-507.ebuild | 39 |
5 files changed, 56 insertions, 8 deletions
diff --git a/sci-biology/rebase/ChangeLog b/sci-biology/rebase/ChangeLog index 7b9629d5c6e7..9dbfc910bf7e 100644 --- a/sci-biology/rebase/ChangeLog +++ b/sci-biology/rebase/ChangeLog @@ -1,6 +1,12 @@ # ChangeLog for sci-biology/rebase # Copyright 2000-2005 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/ChangeLog,v 1.22 2005/06/26 18:19:10 j4rg0n Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/ChangeLog,v 1.23 2005/07/08 01:42:33 ribosome Exp $ + +*rebase-507 (08 Jul 2005) + + 08 Jul 2005; Olivier Fisette <ribosome@gentoo.org> rebase-506.ebuild, + +rebase-507.ebuild: + New version: 507. Added 506 to x86. 26 Jun 2005; Lina Pezzella <j4rg0n@gentoo.org> rebase-505.ebuild: Stable ppc-macos diff --git a/sci-biology/rebase/Manifest b/sci-biology/rebase/Manifest index 40ab969f4709..22fb7cd706b0 100644 --- a/sci-biology/rebase/Manifest +++ b/sci-biology/rebase/Manifest @@ -1,10 +1,12 @@ -MD5 490bc17dd60ef5db120f35ebe80f4cb0 ChangeLog 4027 -MD5 550f8d428f3e75690b43d32df6aa60cd metadata.xml 900 +MD5 6be4bf0d70171c4fa88a76a2212c6b2a rebase-506.ebuild 1104 MD5 5fa95c2f2ad17343c0eb4b6ca755f356 rebase-503.ebuild 1093 -MD5 09995c6206ec61ffb1b9ab7b1d42b630 rebase-504.ebuild 1101 MD5 3b10133e907390c0f7af6f22e50c3582 rebase-505.ebuild 1100 -MD5 4b39e6bbf2ce2c3e3e01c5392b755ef5 rebase-506.ebuild 1105 -MD5 d6f28d28944c2a7a89f538b5e2f6ca59 files/digest-rebase-504 63 +MD5 4b39e6bbf2ce2c3e3e01c5392b755ef5 rebase-507.ebuild 1105 +MD5 09995c6206ec61ffb1b9ab7b1d42b630 rebase-504.ebuild 1101 +MD5 490bc17dd60ef5db120f35ebe80f4cb0 ChangeLog 4027 +MD5 550f8d428f3e75690b43d32df6aa60cd metadata.xml 900 MD5 4dadc55666a0a297406ac775307bfc29 files/digest-rebase-503 63 +MD5 d6f28d28944c2a7a89f538b5e2f6ca59 files/digest-rebase-504 63 MD5 ea8e6db2f49c76188695eded7e22ea33 files/digest-rebase-505 63 MD5 9db4b0bbf4fd2bfaf23f3434ac71e8f5 files/digest-rebase-506 63 +MD5 50cb82dc8445892e84b0858103dbbc74 files/digest-rebase-507 63 diff --git a/sci-biology/rebase/files/digest-rebase-507 b/sci-biology/rebase/files/digest-rebase-507 new file mode 100644 index 000000000000..50243b56cd0b --- /dev/null +++ b/sci-biology/rebase/files/digest-rebase-507 @@ -0,0 +1 @@ +MD5 6cbb5e2fd8029c10898e7a35c102b283 rebase-507.tar.bz2 179451 diff --git a/sci-biology/rebase/rebase-506.ebuild b/sci-biology/rebase/rebase-506.ebuild index eb45926e8fbf..3199e4e72c7f 100644 --- a/sci-biology/rebase/rebase-506.ebuild +++ b/sci-biology/rebase/rebase-506.ebuild @@ -1,6 +1,6 @@ # Copyright 1999-2005 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/rebase-506.ebuild,v 1.1 2005/06/03 05:04:34 ribosome Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/rebase-506.ebuild,v 1.2 2005/07/08 01:42:33 ribosome Exp $ DESCRIPTION="A restriction enzyme database" HOMEPAGE="http://rebase.neb.com" @@ -8,7 +8,7 @@ SRC_URI="mirror://gentoo/${P}.tar.bz2" LICENSE="public-domain" SLOT="0" -KEYWORDS="~x86 ~ppc ~amd64 ~ppc-macos ~ppc64" +KEYWORDS="x86 ~ppc ~amd64 ~ppc-macos ~ppc64" IUSE="emboss minimal" # Minimal build keeps only the indexed files (if applicable) and the documentation. # The non-indexed database is not installed. diff --git a/sci-biology/rebase/rebase-507.ebuild b/sci-biology/rebase/rebase-507.ebuild new file mode 100644 index 000000000000..fb6319348319 --- /dev/null +++ b/sci-biology/rebase/rebase-507.ebuild @@ -0,0 +1,39 @@ +# Copyright 1999-2005 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/rebase-507.ebuild,v 1.1 2005/07/08 01:42:33 ribosome Exp $ + +DESCRIPTION="A restriction enzyme database" +HOMEPAGE="http://rebase.neb.com" +SRC_URI="mirror://gentoo/${P}.tar.bz2" +LICENSE="public-domain" + +SLOT="0" +KEYWORDS="~x86 ~ppc ~amd64 ~ppc-macos ~ppc64" +IUSE="emboss minimal" +# Minimal build keeps only the indexed files (if applicable) and the documentation. +# The non-indexed database is not installed. + +DEPEND="emboss? ( sci-biology/emboss )" + +src_compile() { + if use emboss; then + echo + einfo "Indexing ${PN} for usage with EMBOSS." + mkdir REBASE + EMBOSS_DATA=. rebaseextract -auto -infile withrefm.${PV} \ + -protofile proto.${PV} || die "Indexing ${PN} failed." + echo + fi +} + +src_install() { + if ! use minimal; then + insinto /usr/share/${PN} + doins withrefm.${PV} proto.${PV} + fi + newdoc REBASE.DOC README + if use emboss; then + insinto /usr/share/EMBOSS/data/REBASE + doins REBASE/{embossre.enz,embossre.ref,embossre.sup} + fi +} |